Gene : Carub.0005s2958 C. rubella v1.1
Defline:  (1 of 2) PTHR10168//PTHR10168:SF81 - GLUTAREDOXIN // MONOTHIOL GLUTAREDOXIN-S1-RELATED Genomic Order:  2958
Name:  ? Carub.0005s2958 Secondary Identifier:  ? PAC:39225034
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2958 0.5kb upstream 0.5kb upstream 809 true scaffold_5: 13505031-13505839 Capsella rubella
Carub.0005s2958 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13505340-13505839 Capsella rubella
Carub.0005s2958 0.5kb downstream 0.5kb downstream 809 true scaffold_5: 13504531-13505339 Capsella rubella
Carub.0005s2958 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13504531-13505030 Capsella rubella
Carub.0005s2958 1.0kb upstream 1.0kb upstream 1309 true scaffold_5: 13505031-13506339 Capsella rubella
Carub.0005s2958 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13505340-13506339 Capsella rubella
Carub.0005s2958 1.0kb downstream 1.0kb downstream 1309 true scaffold_5: 13504031-13505339 Capsella rubella
Carub.0005s2958 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13504031-13505030 Capsella rubella
Carub.0005s2958 2.0kb upstream 2.0kb upstream 2309 true scaffold_5: 13505031-13507339 Capsella rubella
Carub.0005s2958 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13505340-13507339 Capsella rubella
Carub.0005s2958 2.0kb downstream 2.0kb downstream 2309 true scaffold_5: 13503031-13505339 Capsella rubella
Carub.0005s2958 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13503031-13505030 Capsella rubella
Carub.0005s2958 5.0kb upstream 5.0kb upstream 5309 true scaffold_5: 13505031-13510339 Capsella rubella
Carub.0005s2958 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13505340-13510339 Capsella rubella
Carub.0005s2958 5.0kb downstream 5.0kb downstream 5309 true scaffold_5: 13500031-13505339 Capsella rubella
Carub.0005s2958 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13500031-13505030 Capsella rubella
Carub.0005s2958 10.0kb upstream 10.0kb upstream 10309 true scaffold_5: 13505031-13515339 Capsella rubella
Carub.0005s2958 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13505340-13515339 Capsella rubella
Carub.0005s2958 10.0kb downstream 10.0kb downstream 10309 true scaffold_5: 13495031-13505339 Capsella rubella
Carub.0005s2958 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13495031-13505030 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360767 5261 Brassicaceae View MSA
123841307 5264 Brassicales-Malvales View MSA
124351084 5266 SBM View MSA
124251213 5268 Malvidae View MSA
124070474 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain