Gene : Carub.0001s2393 C. rubella v1.1
Defline:  (1 of 2) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED Genomic Order:  2393
Name:  ? Carub.0001s2393 Secondary Identifier:  ? PAC:39230798
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2393 0.5kb upstream 0.5kb upstream 1541 true scaffold_1: 8586770-8588310 Capsella rubella
Carub.0001s2393 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8587811-8588310 Capsella rubella
Carub.0001s2393 0.5kb downstream 0.5kb downstream 1541 true scaffold_1: 8586270-8587810 Capsella rubella
Carub.0001s2393 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8586270-8586769 Capsella rubella
Carub.0001s2393 1.0kb upstream 1.0kb upstream 2041 true scaffold_1: 8586770-8588810 Capsella rubella
Carub.0001s2393 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8587811-8588810 Capsella rubella
Carub.0001s2393 1.0kb downstream 1.0kb downstream 2041 true scaffold_1: 8585770-8587810 Capsella rubella
Carub.0001s2393 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8585770-8586769 Capsella rubella
Carub.0001s2393 2.0kb upstream 2.0kb upstream 3041 true scaffold_1: 8586770-8589810 Capsella rubella
Carub.0001s2393 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8587811-8589810 Capsella rubella
Carub.0001s2393 2.0kb downstream 2.0kb downstream 3041 true scaffold_1: 8584770-8587810 Capsella rubella
Carub.0001s2393 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8584770-8586769 Capsella rubella
Carub.0001s2393 5.0kb upstream 5.0kb upstream 6041 true scaffold_1: 8586770-8592810 Capsella rubella
Carub.0001s2393 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8587811-8592810 Capsella rubella
Carub.0001s2393 5.0kb downstream 5.0kb downstream 6041 true scaffold_1: 8581770-8587810 Capsella rubella
Carub.0001s2393 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8581770-8586769 Capsella rubella
Carub.0001s2393 10.0kb upstream 10.0kb upstream 11041 true scaffold_1: 8586770-8597810 Capsella rubella
Carub.0001s2393 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8587811-8597810 Capsella rubella
Carub.0001s2393 10.0kb downstream 10.0kb downstream 11041 true scaffold_1: 8576770-8587810 Capsella rubella
Carub.0001s2393 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8576770-8586769 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375323 5261 Brassicaceae View MSA
123800927 5264 Brassicales-Malvales View MSA
124298282 5266 SBM View MSA
124149961 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain