Gene : Carub.0001s2447 C. rubella v1.1
Defline:  (1 of 5) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  2447
Name:  ? Carub.0001s2447 Secondary Identifier:  ? PAC:39230013
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4821 Capsella rubella pathologic  
Crubella PWY-7346 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2447 0.5kb upstream 0.5kb upstream 2791 true scaffold_1: 8797779-8800569 Capsella rubella
Carub.0001s2447 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8800070-8800569 Capsella rubella
Carub.0001s2447 0.5kb downstream 0.5kb downstream 2791 true scaffold_1: 8797279-8800069 Capsella rubella
Carub.0001s2447 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8797279-8797778 Capsella rubella
Carub.0001s2447 1.0kb upstream 1.0kb upstream 3291 true scaffold_1: 8797779-8801069 Capsella rubella
Carub.0001s2447 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8800070-8801069 Capsella rubella
Carub.0001s2447 1.0kb downstream 1.0kb downstream 3291 true scaffold_1: 8796779-8800069 Capsella rubella
Carub.0001s2447 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8796779-8797778 Capsella rubella
Carub.0001s2447 2.0kb upstream 2.0kb upstream 4291 true scaffold_1: 8797779-8802069 Capsella rubella
Carub.0001s2447 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8800070-8802069 Capsella rubella
Carub.0001s2447 2.0kb downstream 2.0kb downstream 4291 true scaffold_1: 8795779-8800069 Capsella rubella
Carub.0001s2447 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8795779-8797778 Capsella rubella
Carub.0001s2447 5.0kb upstream 5.0kb upstream 7291 true scaffold_1: 8797779-8805069 Capsella rubella
Carub.0001s2447 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8800070-8805069 Capsella rubella
Carub.0001s2447 5.0kb downstream 5.0kb downstream 7291 true scaffold_1: 8792779-8800069 Capsella rubella
Carub.0001s2447 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8792779-8797778 Capsella rubella
Carub.0001s2447 10.0kb upstream 10.0kb upstream 12291 true scaffold_1: 8797779-8810069 Capsella rubella
Carub.0001s2447 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8800070-8810069 Capsella rubella
Carub.0001s2447 10.0kb downstream 10.0kb downstream 12291 true scaffold_1: 8787779-8800069 Capsella rubella
Carub.0001s2447 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8787779-8797778 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368515 5261 Brassicaceae View MSA
123799589 5264 Brassicales-Malvales View MSA
124297092 5266 SBM View MSA
124253382 5268 Malvidae View MSA
124072920 5270 Rosid View MSA
123748185 5271 Pentapetalae View MSA
122786809 5272 Eudicot View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain