Gene : Carub.0005s2996 C. rubella v1.1
Defline:  (1 of 4) PTHR31351:SF4 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MWI23-RELATED Genomic Order:  2996
Name:  ? Carub.0005s2996 Secondary Identifier:  ? PAC:39225965
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2996 0.5kb upstream 0.5kb upstream 3682 true scaffold_5: 13648274-13651955 Capsella rubella
Carub.0005s2996 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13648274-13648773 Capsella rubella
Carub.0005s2996 0.5kb downstream 0.5kb downstream 3682 true scaffold_5: 13648774-13652455 Capsella rubella
Carub.0005s2996 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13651956-13652455 Capsella rubella
Carub.0005s2996 1.0kb upstream 1.0kb upstream 4182 true scaffold_5: 13647774-13651955 Capsella rubella
Carub.0005s2996 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13647774-13648773 Capsella rubella
Carub.0005s2996 1.0kb downstream 1.0kb downstream 4182 true scaffold_5: 13648774-13652955 Capsella rubella
Carub.0005s2996 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13651956-13652955 Capsella rubella
Carub.0005s2996 2.0kb upstream 2.0kb upstream 5182 true scaffold_5: 13646774-13651955 Capsella rubella
Carub.0005s2996 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13646774-13648773 Capsella rubella
Carub.0005s2996 2.0kb downstream 2.0kb downstream 5182 true scaffold_5: 13648774-13653955 Capsella rubella
Carub.0005s2996 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13651956-13653955 Capsella rubella
Carub.0005s2996 5.0kb upstream 5.0kb upstream 8182 true scaffold_5: 13643774-13651955 Capsella rubella
Carub.0005s2996 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13643774-13648773 Capsella rubella
Carub.0005s2996 5.0kb downstream 5.0kb downstream 8182 true scaffold_5: 13648774-13656955 Capsella rubella
Carub.0005s2996 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13651956-13656955 Capsella rubella
Carub.0005s2996 10.0kb upstream 10.0kb upstream 13182 true scaffold_5: 13638774-13651955 Capsella rubella
Carub.0005s2996 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13638774-13648773 Capsella rubella
Carub.0005s2996 10.0kb downstream 10.0kb downstream 13182 true scaffold_5: 13648774-13661955 Capsella rubella
Carub.0005s2996 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13651956-13661955 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361104 5261 Brassicaceae View MSA
123827461 5264 Brassicales-Malvales View MSA
124338538 5266 SBM View MSA
124254442 5268 Malvidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain