Gene : Carub.0001s2202 C. rubella v1.1
Defline:  (1 of 3) PTHR11969:SF22 - TRANSCRIPTION FACTOR BHLH71-RELATED Genomic Order:  2202
Name:  ? Carub.0001s2202 Secondary Identifier:  ? PAC:39231043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2202 0.5kb upstream 0.5kb upstream 2673 true scaffold_1: 7925798-7928470 Capsella rubella
Carub.0001s2202 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7927971-7928470 Capsella rubella
Carub.0001s2202 0.5kb downstream 0.5kb downstream 2673 true scaffold_1: 7925298-7927970 Capsella rubella
Carub.0001s2202 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7925298-7925797 Capsella rubella
Carub.0001s2202 1.0kb upstream 1.0kb upstream 3173 true scaffold_1: 7925798-7928970 Capsella rubella
Carub.0001s2202 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7927971-7928970 Capsella rubella
Carub.0001s2202 1.0kb downstream 1.0kb downstream 3173 true scaffold_1: 7924798-7927970 Capsella rubella
Carub.0001s2202 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7924798-7925797 Capsella rubella
Carub.0001s2202 2.0kb upstream 2.0kb upstream 4173 true scaffold_1: 7925798-7929970 Capsella rubella
Carub.0001s2202 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7927971-7929970 Capsella rubella
Carub.0001s2202 2.0kb downstream 2.0kb downstream 4173 true scaffold_1: 7923798-7927970 Capsella rubella
Carub.0001s2202 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7923798-7925797 Capsella rubella
Carub.0001s2202 5.0kb upstream 5.0kb upstream 7173 true scaffold_1: 7925798-7932970 Capsella rubella
Carub.0001s2202 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7927971-7932970 Capsella rubella
Carub.0001s2202 5.0kb downstream 5.0kb downstream 7173 true scaffold_1: 7920798-7927970 Capsella rubella
Carub.0001s2202 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7920798-7925797 Capsella rubella
Carub.0001s2202 10.0kb upstream 10.0kb upstream 12173 true scaffold_1: 7925798-7937970 Capsella rubella
Carub.0001s2202 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7927971-7937970 Capsella rubella
Carub.0001s2202 10.0kb downstream 10.0kb downstream 12173 true scaffold_1: 7915798-7927970 Capsella rubella
Carub.0001s2202 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7915798-7925797 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366452 5261 Brassicaceae View MSA
123836851 5264 Brassicales-Malvales View MSA
124345598 5266 SBM View MSA
124253153 5268 Malvidae View MSA
124070189 5270 Rosid View MSA
123749285 5271 Pentapetalae View MSA
122794835 5272 Eudicot View MSA
122051154 5273 Angiosperm View MSA
121350598 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain