Gene : Carub.0001s2212 C. rubella v1.1

Defline:  (1 of 1) PTHR10024:SF197 - C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN Genomic Order:  2212
Name:  ? Carub.0001s2212 Secondary Identifier:  ? PAC:39229544

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2212 0.5kb upstream 0.5kb upstream 3584 true scaffold_1: 7968112-7971695 Capsella rubella
Carub.0001s2212 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7968112-7968611 Capsella rubella
Carub.0001s2212 0.5kb downstream 0.5kb downstream 3584 true scaffold_1: 7968612-7972195 Capsella rubella
Carub.0001s2212 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7971696-7972195 Capsella rubella
Carub.0001s2212 1.0kb upstream 1.0kb upstream 4084 true scaffold_1: 7967612-7971695 Capsella rubella
Carub.0001s2212 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7967612-7968611 Capsella rubella
Carub.0001s2212 1.0kb downstream 1.0kb downstream 4084 true scaffold_1: 7968612-7972695 Capsella rubella
Carub.0001s2212 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7971696-7972695 Capsella rubella
Carub.0001s2212 2.0kb upstream 2.0kb upstream 5084 true scaffold_1: 7966612-7971695 Capsella rubella
Carub.0001s2212 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7966612-7968611 Capsella rubella
Carub.0001s2212 2.0kb downstream 2.0kb downstream 5084 true scaffold_1: 7968612-7973695 Capsella rubella
Carub.0001s2212 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7971696-7973695 Capsella rubella
Carub.0001s2212 5.0kb upstream 5.0kb upstream 8084 true scaffold_1: 7963612-7971695 Capsella rubella
Carub.0001s2212 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7963612-7968611 Capsella rubella
Carub.0001s2212 5.0kb downstream 5.0kb downstream 8084 true scaffold_1: 7968612-7976695 Capsella rubella
Carub.0001s2212 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7971696-7976695 Capsella rubella
Carub.0001s2212 10.0kb upstream 10.0kb upstream 13084 true scaffold_1: 7958612-7971695 Capsella rubella
Carub.0001s2212 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7958612-7968611 Capsella rubella
Carub.0001s2212 10.0kb downstream 10.0kb downstream 13084 true scaffold_1: 7968612-7981695 Capsella rubella
Carub.0001s2212 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7971696-7981695 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026435 5273 Angiosperm View MSA
122368560 5261 Brassicaceae View MSA
123830217 5264 Brassicales-Malvales View MSA
124341906 5266 SBM View MSA
124241734 5268 Malvidae View MSA
124063760 5270 Rosid View MSA
123752822 5271 Pentapetalae View MSA
122787154 5272 Eudicot View MSA
121350979 5274 Embryophyte View MSA
123427289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain