Gene : Carub.0001s2243 C. rubella v1.1

Defline:  (1 of 1) PTHR12832:SF11 - PROTEIN M05D6.2 Genomic Order:  2243
Name:  ? Carub.0001s2243 Secondary Identifier:  ? PAC:39229356

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2243 0.5kb upstream 0.5kb upstream 5395 true scaffold_1: 8098903-8104297 Capsella rubella
Carub.0001s2243 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8098903-8099402 Capsella rubella
Carub.0001s2243 0.5kb downstream 0.5kb downstream 5395 true scaffold_1: 8099403-8104797 Capsella rubella
Carub.0001s2243 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8104298-8104797 Capsella rubella
Carub.0001s2243 1.0kb upstream 1.0kb upstream 5895 true scaffold_1: 8098403-8104297 Capsella rubella
Carub.0001s2243 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8098403-8099402 Capsella rubella
Carub.0001s2243 1.0kb downstream 1.0kb downstream 5895 true scaffold_1: 8099403-8105297 Capsella rubella
Carub.0001s2243 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8104298-8105297 Capsella rubella
Carub.0001s2243 2.0kb upstream 2.0kb upstream 6895 true scaffold_1: 8097403-8104297 Capsella rubella
Carub.0001s2243 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8097403-8099402 Capsella rubella
Carub.0001s2243 2.0kb downstream 2.0kb downstream 6895 true scaffold_1: 8099403-8106297 Capsella rubella
Carub.0001s2243 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8104298-8106297 Capsella rubella
Carub.0001s2243 5.0kb upstream 5.0kb upstream 9895 true scaffold_1: 8094403-8104297 Capsella rubella
Carub.0001s2243 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8094403-8099402 Capsella rubella
Carub.0001s2243 5.0kb downstream 5.0kb downstream 9895 true scaffold_1: 8099403-8109297 Capsella rubella
Carub.0001s2243 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8104298-8109297 Capsella rubella
Carub.0001s2243 10.0kb upstream 10.0kb upstream 14895 true scaffold_1: 8089403-8104297 Capsella rubella
Carub.0001s2243 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8089403-8099402 Capsella rubella
Carub.0001s2243 10.0kb downstream 10.0kb downstream 14895 true scaffold_1: 8099403-8114297 Capsella rubella
Carub.0001s2243 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8104298-8114297 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373815 5261 Brassicaceae View MSA
123836095 5264 Brassicales-Malvales View MSA
124346419 5266 SBM View MSA
124240744 5268 Malvidae View MSA
124065811 5270 Rosid View MSA
123746081 5271 Pentapetalae View MSA
122792060 5272 Eudicot View MSA
122043242 5273 Angiosperm View MSA
121345323 5274 Embryophyte View MSA
123426758 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain