Gene : Carub.0001s2079 C. rubella v1.1
Defline:  (1 of 2) PTHR13856//PTHR13856:SF95 - VHS DOMAIN CONTAINING PROTEIN FAMILY // F24J8.3 PROTEIN Genomic Order:  2079
Name:  ? Carub.0001s2079 Secondary Identifier:  ? PAC:39228490
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2079 0.5kb upstream 0.5kb upstream 3585 true scaffold_1: 7470809-7474393 Capsella rubella
Carub.0001s2079 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7473894-7474393 Capsella rubella
Carub.0001s2079 0.5kb downstream 0.5kb downstream 3585 true scaffold_1: 7470309-7473893 Capsella rubella
Carub.0001s2079 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7470309-7470808 Capsella rubella
Carub.0001s2079 1.0kb upstream 1.0kb upstream 4085 true scaffold_1: 7470809-7474893 Capsella rubella
Carub.0001s2079 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7473894-7474893 Capsella rubella
Carub.0001s2079 1.0kb downstream 1.0kb downstream 4085 true scaffold_1: 7469809-7473893 Capsella rubella
Carub.0001s2079 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7469809-7470808 Capsella rubella
Carub.0001s2079 2.0kb upstream 2.0kb upstream 5085 true scaffold_1: 7470809-7475893 Capsella rubella
Carub.0001s2079 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7473894-7475893 Capsella rubella
Carub.0001s2079 2.0kb downstream 2.0kb downstream 5085 true scaffold_1: 7468809-7473893 Capsella rubella
Carub.0001s2079 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7468809-7470808 Capsella rubella
Carub.0001s2079 5.0kb upstream 5.0kb upstream 8085 true scaffold_1: 7470809-7478893 Capsella rubella
Carub.0001s2079 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7473894-7478893 Capsella rubella
Carub.0001s2079 5.0kb downstream 5.0kb downstream 8085 true scaffold_1: 7465809-7473893 Capsella rubella
Carub.0001s2079 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7465809-7470808 Capsella rubella
Carub.0001s2079 10.0kb upstream 10.0kb upstream 13085 true scaffold_1: 7470809-7483893 Capsella rubella
Carub.0001s2079 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7473894-7483893 Capsella rubella
Carub.0001s2079 10.0kb downstream 10.0kb downstream 13085 true scaffold_1: 7460809-7473893 Capsella rubella
Carub.0001s2079 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7460809-7470808 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362983 5261 Brassicaceae View MSA
123832457 5264 Brassicales-Malvales View MSA
124344615 5266 SBM View MSA
124250197 5268 Malvidae View MSA
124064849 5270 Rosid View MSA
123740461 5271 Pentapetalae View MSA
122792029 5272 Eudicot View MSA
122045200 5273 Angiosperm View MSA
121349203 5274 Embryophyte View MSA
123427882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain