Gene : Carub.0001s2084 C. rubella v1.1
Defline:  (1 of 1) PTHR23023//PTHR23023:SF121 - DIMETHYLANILINE MONOOXYGENASE // INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  2084
Name:  ? Carub.0001s2084 Secondary Identifier:  ? PAC:39231418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWYDQC-4 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2084 0.5kb upstream 0.5kb upstream 1856 true scaffold_1: 7486907-7488762 Capsella rubella
Carub.0001s2084 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7486907-7487406 Capsella rubella
Carub.0001s2084 0.5kb downstream 0.5kb downstream 1856 true scaffold_1: 7487407-7489262 Capsella rubella
Carub.0001s2084 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7488763-7489262 Capsella rubella
Carub.0001s2084 1.0kb upstream 1.0kb upstream 2356 true scaffold_1: 7486407-7488762 Capsella rubella
Carub.0001s2084 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7486407-7487406 Capsella rubella
Carub.0001s2084 1.0kb downstream 1.0kb downstream 2356 true scaffold_1: 7487407-7489762 Capsella rubella
Carub.0001s2084 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7488763-7489762 Capsella rubella
Carub.0001s2084 2.0kb upstream 2.0kb upstream 3356 true scaffold_1: 7485407-7488762 Capsella rubella
Carub.0001s2084 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7485407-7487406 Capsella rubella
Carub.0001s2084 2.0kb downstream 2.0kb downstream 3356 true scaffold_1: 7487407-7490762 Capsella rubella
Carub.0001s2084 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7488763-7490762 Capsella rubella
Carub.0001s2084 5.0kb upstream 5.0kb upstream 6356 true scaffold_1: 7482407-7488762 Capsella rubella
Carub.0001s2084 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7482407-7487406 Capsella rubella
Carub.0001s2084 5.0kb downstream 5.0kb downstream 6356 true scaffold_1: 7487407-7493762 Capsella rubella
Carub.0001s2084 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7488763-7493762 Capsella rubella
Carub.0001s2084 10.0kb upstream 10.0kb upstream 11356 true scaffold_1: 7477407-7488762 Capsella rubella
Carub.0001s2084 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7477407-7487406 Capsella rubella
Carub.0001s2084 10.0kb downstream 10.0kb downstream 11356 true scaffold_1: 7487407-7498762 Capsella rubella
Carub.0001s2084 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7488763-7498762 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378737 5261 Brassicaceae View MSA
123835695 5264 Brassicales-Malvales View MSA
124349496 5266 SBM View MSA
124250017 5268 Malvidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain