Gene : Carub.0001s2136 C. rubella v1.1
Defline:  (1 of 52) PF00892 - EamA-like transporter family (EamA) Genomic Order:  2136
Name:  ? Carub.0001s2136 Secondary Identifier:  ? PAC:39228910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2136 0.5kb upstream 0.5kb upstream 2654 true scaffold_1: 7680318-7682971 Capsella rubella
Carub.0001s2136 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7682472-7682971 Capsella rubella
Carub.0001s2136 0.5kb downstream 0.5kb downstream 2654 true scaffold_1: 7679818-7682471 Capsella rubella
Carub.0001s2136 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7679818-7680317 Capsella rubella
Carub.0001s2136 1.0kb upstream 1.0kb upstream 3154 true scaffold_1: 7680318-7683471 Capsella rubella
Carub.0001s2136 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7682472-7683471 Capsella rubella
Carub.0001s2136 1.0kb downstream 1.0kb downstream 3154 true scaffold_1: 7679318-7682471 Capsella rubella
Carub.0001s2136 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7679318-7680317 Capsella rubella
Carub.0001s2136 2.0kb upstream 2.0kb upstream 4154 true scaffold_1: 7680318-7684471 Capsella rubella
Carub.0001s2136 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7682472-7684471 Capsella rubella
Carub.0001s2136 2.0kb downstream 2.0kb downstream 4154 true scaffold_1: 7678318-7682471 Capsella rubella
Carub.0001s2136 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7678318-7680317 Capsella rubella
Carub.0001s2136 5.0kb upstream 5.0kb upstream 7154 true scaffold_1: 7680318-7687471 Capsella rubella
Carub.0001s2136 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7682472-7687471 Capsella rubella
Carub.0001s2136 5.0kb downstream 5.0kb downstream 7154 true scaffold_1: 7675318-7682471 Capsella rubella
Carub.0001s2136 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7675318-7680317 Capsella rubella
Carub.0001s2136 10.0kb upstream 10.0kb upstream 12154 true scaffold_1: 7680318-7692471 Capsella rubella
Carub.0001s2136 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7682472-7692471 Capsella rubella
Carub.0001s2136 10.0kb downstream 10.0kb downstream 12154 true scaffold_1: 7670318-7682471 Capsella rubella
Carub.0001s2136 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7670318-7680317 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374840 5261 Brassicaceae View MSA
123839059 5264 Brassicales-Malvales View MSA
124342021 5266 SBM View MSA
124253856 5268 Malvidae View MSA
124065362 5270 Rosid View MSA
123750992 5271 Pentapetalae View MSA
122796473 5272 Eudicot View MSA
122051256 5273 Angiosperm View MSA
121351883 5274 Embryophyte View MSA
123382389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain