Gene : Carub.0001s2135 C. rubella v1.1
Defline:  (1 of 3) PTHR33734:SF3 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  2135
Name:  ? Carub.0001s2135 Secondary Identifier:  ? PAC:39230684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s2135 0.5kb upstream 0.5kb upstream 2680 true scaffold_1: 7677377-7680056 Capsella rubella
Carub.0001s2135 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7677377-7677876 Capsella rubella
Carub.0001s2135 0.5kb downstream 0.5kb downstream 2680 true scaffold_1: 7677877-7680556 Capsella rubella
Carub.0001s2135 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7680057-7680556 Capsella rubella
Carub.0001s2135 1.0kb upstream 1.0kb upstream 3180 true scaffold_1: 7676877-7680056 Capsella rubella
Carub.0001s2135 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7676877-7677876 Capsella rubella
Carub.0001s2135 1.0kb downstream 1.0kb downstream 3180 true scaffold_1: 7677877-7681056 Capsella rubella
Carub.0001s2135 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7680057-7681056 Capsella rubella
Carub.0001s2135 2.0kb upstream 2.0kb upstream 4180 true scaffold_1: 7675877-7680056 Capsella rubella
Carub.0001s2135 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7675877-7677876 Capsella rubella
Carub.0001s2135 2.0kb downstream 2.0kb downstream 4180 true scaffold_1: 7677877-7682056 Capsella rubella
Carub.0001s2135 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7680057-7682056 Capsella rubella
Carub.0001s2135 5.0kb upstream 5.0kb upstream 7180 true scaffold_1: 7672877-7680056 Capsella rubella
Carub.0001s2135 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7672877-7677876 Capsella rubella
Carub.0001s2135 5.0kb downstream 5.0kb downstream 7180 true scaffold_1: 7677877-7685056 Capsella rubella
Carub.0001s2135 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7680057-7685056 Capsella rubella
Carub.0001s2135 10.0kb upstream 10.0kb upstream 12180 true scaffold_1: 7667877-7680056 Capsella rubella
Carub.0001s2135 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7667877-7677876 Capsella rubella
Carub.0001s2135 10.0kb downstream 10.0kb downstream 12180 true scaffold_1: 7677877-7690056 Capsella rubella
Carub.0001s2135 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7680057-7690056 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361690 5261 Brassicaceae View MSA
123839538 5264 Brassicales-Malvales View MSA
124337865 5266 SBM View MSA
124243393 5268 Malvidae View MSA
124060398 5270 Rosid View MSA
123740598 5271 Pentapetalae View MSA
122791111 5272 Eudicot View MSA
122046889 5273 Angiosperm View MSA
121350976 5274 Embryophyte View MSA
123381953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain