Gene : Carub.0001s1806 C. rubella v1.1
Defline:  (1 of 5) PTHR31086:SF20 - ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED Genomic Order:  1806
Name:  ? Carub.0001s1806 Secondary Identifier:  ? PAC:39229698
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1806 0.5kb upstream 0.5kb upstream 2899 true scaffold_1: 6368318-6371216 Capsella rubella
Carub.0001s1806 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6368318-6368817 Capsella rubella
Carub.0001s1806 0.5kb downstream 0.5kb downstream 2899 true scaffold_1: 6368818-6371716 Capsella rubella
Carub.0001s1806 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6371217-6371716 Capsella rubella
Carub.0001s1806 1.0kb upstream 1.0kb upstream 3399 true scaffold_1: 6367818-6371216 Capsella rubella
Carub.0001s1806 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6367818-6368817 Capsella rubella
Carub.0001s1806 1.0kb downstream 1.0kb downstream 3399 true scaffold_1: 6368818-6372216 Capsella rubella
Carub.0001s1806 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6371217-6372216 Capsella rubella
Carub.0001s1806 2.0kb upstream 2.0kb upstream 4399 true scaffold_1: 6366818-6371216 Capsella rubella
Carub.0001s1806 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6366818-6368817 Capsella rubella
Carub.0001s1806 2.0kb downstream 2.0kb downstream 4399 true scaffold_1: 6368818-6373216 Capsella rubella
Carub.0001s1806 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6371217-6373216 Capsella rubella
Carub.0001s1806 5.0kb upstream 5.0kb upstream 7399 true scaffold_1: 6363818-6371216 Capsella rubella
Carub.0001s1806 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6363818-6368817 Capsella rubella
Carub.0001s1806 5.0kb downstream 5.0kb downstream 7399 true scaffold_1: 6368818-6376216 Capsella rubella
Carub.0001s1806 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6371217-6376216 Capsella rubella
Carub.0001s1806 10.0kb upstream 10.0kb upstream 12399 true scaffold_1: 6358818-6371216 Capsella rubella
Carub.0001s1806 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6358818-6368817 Capsella rubella
Carub.0001s1806 10.0kb downstream 10.0kb downstream 12399 true scaffold_1: 6368818-6381216 Capsella rubella
Carub.0001s1806 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6371217-6381216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361448 5261 Brassicaceae View MSA
123798175 5264 Brassicales-Malvales View MSA
124295847 5266 SBM View MSA
124148172 5268 Malvidae View MSA
123874222 5270 Rosid View MSA
123751150 5271 Pentapetalae View MSA
122792195 5272 Eudicot View MSA
122047214 5273 Angiosperm View MSA
121351604 5274 Embryophyte View MSA
123428514 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain