Gene : Carub.0001s1976 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  1976
Name:  ? Carub.0001s1976 Secondary Identifier:  ? PAC:39230611
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1976 0.5kb upstream 0.5kb upstream 2783 true scaffold_1: 7047581-7050363 Capsella rubella
Carub.0001s1976 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7047581-7048080 Capsella rubella
Carub.0001s1976 0.5kb downstream 0.5kb downstream 2783 true scaffold_1: 7048081-7050863 Capsella rubella
Carub.0001s1976 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7050364-7050863 Capsella rubella
Carub.0001s1976 1.0kb upstream 1.0kb upstream 3283 true scaffold_1: 7047081-7050363 Capsella rubella
Carub.0001s1976 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7047081-7048080 Capsella rubella
Carub.0001s1976 1.0kb downstream 1.0kb downstream 3283 true scaffold_1: 7048081-7051363 Capsella rubella
Carub.0001s1976 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7050364-7051363 Capsella rubella
Carub.0001s1976 2.0kb upstream 2.0kb upstream 4283 true scaffold_1: 7046081-7050363 Capsella rubella
Carub.0001s1976 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7046081-7048080 Capsella rubella
Carub.0001s1976 2.0kb downstream 2.0kb downstream 4283 true scaffold_1: 7048081-7052363 Capsella rubella
Carub.0001s1976 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7050364-7052363 Capsella rubella
Carub.0001s1976 5.0kb upstream 5.0kb upstream 7283 true scaffold_1: 7043081-7050363 Capsella rubella
Carub.0001s1976 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7043081-7048080 Capsella rubella
Carub.0001s1976 5.0kb downstream 5.0kb downstream 7283 true scaffold_1: 7048081-7055363 Capsella rubella
Carub.0001s1976 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7050364-7055363 Capsella rubella
Carub.0001s1976 10.0kb upstream 10.0kb upstream 12283 true scaffold_1: 7038081-7050363 Capsella rubella
Carub.0001s1976 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7038081-7048080 Capsella rubella
Carub.0001s1976 10.0kb downstream 10.0kb downstream 12283 true scaffold_1: 7048081-7060363 Capsella rubella
Carub.0001s1976 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7050364-7060363 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363633 5261 Brassicaceae View MSA
123828553 5264 Brassicales-Malvales View MSA
124321539 5266 SBM View MSA
124252627 5268 Malvidae View MSA
124064804 5270 Rosid View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain