Gene : Carub.0005s3014 C. rubella v1.1
Defline:  (1 of 1) PTHR14155//PTHR14155:SF75 - RING FINGER DOMAIN-CONTAINING // E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  3014
Name:  ? Carub.0005s3014 Secondary Identifier:  ? PAC:39225534
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s3014 0.5kb upstream 0.5kb upstream 2972 true scaffold_5: 13712473-13715444 Capsella rubella
Carub.0005s3014 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 13714945-13715444 Capsella rubella
Carub.0005s3014 0.5kb downstream 0.5kb downstream 2972 true scaffold_5: 13711973-13714944 Capsella rubella
Carub.0005s3014 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 13711973-13712472 Capsella rubella
Carub.0005s3014 1.0kb upstream 1.0kb upstream 3472 true scaffold_5: 13712473-13715944 Capsella rubella
Carub.0005s3014 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 13714945-13715944 Capsella rubella
Carub.0005s3014 1.0kb downstream 1.0kb downstream 3472 true scaffold_5: 13711473-13714944 Capsella rubella
Carub.0005s3014 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 13711473-13712472 Capsella rubella
Carub.0005s3014 2.0kb upstream 2.0kb upstream 4472 true scaffold_5: 13712473-13716944 Capsella rubella
Carub.0005s3014 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 13714945-13716944 Capsella rubella
Carub.0005s3014 2.0kb downstream 2.0kb downstream 4472 true scaffold_5: 13710473-13714944 Capsella rubella
Carub.0005s3014 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 13710473-13712472 Capsella rubella
Carub.0005s3014 5.0kb upstream 5.0kb upstream 7472 true scaffold_5: 13712473-13719944 Capsella rubella
Carub.0005s3014 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 13714945-13719944 Capsella rubella
Carub.0005s3014 5.0kb downstream 5.0kb downstream 7472 true scaffold_5: 13707473-13714944 Capsella rubella
Carub.0005s3014 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 13707473-13712472 Capsella rubella
Carub.0005s3014 10.0kb upstream 10.0kb upstream 12472 true scaffold_5: 13712473-13724944 Capsella rubella
Carub.0005s3014 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 13714945-13724944 Capsella rubella
Carub.0005s3014 10.0kb downstream 10.0kb downstream 12472 true scaffold_5: 13702473-13714944 Capsella rubella
Carub.0005s3014 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 13702473-13712472 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367401 5261 Brassicaceae View MSA
123835643 5264 Brassicales-Malvales View MSA
124349516 5266 SBM View MSA
124246466 5268 Malvidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain