Gene : Carub.0001s1709 C. rubella v1.1
Defline:  (1 of 4) PTHR11200//PTHR11200:SF122 - INOSITOL 5-PHOSPHATASE // PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED Genomic Order:  1709
Name:  ? Carub.0001s1709 Secondary Identifier:  ? PAC:39229281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1709 0.5kb upstream 0.5kb upstream 5487 true scaffold_1: 5984090-5989576 Capsella rubella
Carub.0001s1709 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5984090-5984589 Capsella rubella
Carub.0001s1709 0.5kb downstream 0.5kb downstream 5487 true scaffold_1: 5984590-5990076 Capsella rubella
Carub.0001s1709 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5989577-5990076 Capsella rubella
Carub.0001s1709 1.0kb upstream 1.0kb upstream 5987 true scaffold_1: 5983590-5989576 Capsella rubella
Carub.0001s1709 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5983590-5984589 Capsella rubella
Carub.0001s1709 1.0kb downstream 1.0kb downstream 5987 true scaffold_1: 5984590-5990576 Capsella rubella
Carub.0001s1709 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5989577-5990576 Capsella rubella
Carub.0001s1709 2.0kb upstream 2.0kb upstream 6987 true scaffold_1: 5982590-5989576 Capsella rubella
Carub.0001s1709 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5982590-5984589 Capsella rubella
Carub.0001s1709 2.0kb downstream 2.0kb downstream 6987 true scaffold_1: 5984590-5991576 Capsella rubella
Carub.0001s1709 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5989577-5991576 Capsella rubella
Carub.0001s1709 5.0kb upstream 5.0kb upstream 9987 true scaffold_1: 5979590-5989576 Capsella rubella
Carub.0001s1709 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5979590-5984589 Capsella rubella
Carub.0001s1709 5.0kb downstream 5.0kb downstream 9987 true scaffold_1: 5984590-5994576 Capsella rubella
Carub.0001s1709 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5989577-5994576 Capsella rubella
Carub.0001s1709 10.0kb upstream 10.0kb upstream 14987 true scaffold_1: 5974590-5989576 Capsella rubella
Carub.0001s1709 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5974590-5984589 Capsella rubella
Carub.0001s1709 10.0kb downstream 10.0kb downstream 14987 true scaffold_1: 5984590-5999576 Capsella rubella
Carub.0001s1709 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5989577-5999576 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030672 5273 Angiosperm View MSA
122376874 5261 Brassicaceae View MSA
123801380 5264 Brassicales-Malvales View MSA
124298691 5266 SBM View MSA
124150275 5268 Malvidae View MSA
123875921 5270 Rosid View MSA
123459670 5271 Pentapetalae View MSA
122495059 5272 Eudicot View MSA
121299817 5274 Embryophyte View MSA
123337650 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain