Gene : Carub.0001s1719 C. rubella v1.1
Defline:  (1 of 2) PTHR10992:SF828 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN-RELATED Genomic Order:  1719
Name:  ? Carub.0001s1719 Secondary Identifier:  ? PAC:39231614
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LIPAS-PWY Capsella rubella pathologic  
Crubella PWY-7420 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1719 0.5kb upstream 0.5kb upstream 2187 true scaffold_1: 6028202-6030388 Capsella rubella
Carub.0001s1719 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6028202-6028701 Capsella rubella
Carub.0001s1719 0.5kb downstream 0.5kb downstream 2187 true scaffold_1: 6028702-6030888 Capsella rubella
Carub.0001s1719 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6030389-6030888 Capsella rubella
Carub.0001s1719 1.0kb upstream 1.0kb upstream 2687 true scaffold_1: 6027702-6030388 Capsella rubella
Carub.0001s1719 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6027702-6028701 Capsella rubella
Carub.0001s1719 1.0kb downstream 1.0kb downstream 2687 true scaffold_1: 6028702-6031388 Capsella rubella
Carub.0001s1719 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6030389-6031388 Capsella rubella
Carub.0001s1719 2.0kb upstream 2.0kb upstream 3687 true scaffold_1: 6026702-6030388 Capsella rubella
Carub.0001s1719 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6026702-6028701 Capsella rubella
Carub.0001s1719 2.0kb downstream 2.0kb downstream 3687 true scaffold_1: 6028702-6032388 Capsella rubella
Carub.0001s1719 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6030389-6032388 Capsella rubella
Carub.0001s1719 5.0kb upstream 5.0kb upstream 6687 true scaffold_1: 6023702-6030388 Capsella rubella
Carub.0001s1719 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6023702-6028701 Capsella rubella
Carub.0001s1719 5.0kb downstream 5.0kb downstream 6687 true scaffold_1: 6028702-6035388 Capsella rubella
Carub.0001s1719 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6030389-6035388 Capsella rubella
Carub.0001s1719 10.0kb upstream 10.0kb upstream 11687 true scaffold_1: 6018702-6030388 Capsella rubella
Carub.0001s1719 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6018702-6028701 Capsella rubella
Carub.0001s1719 10.0kb downstream 10.0kb downstream 11687 true scaffold_1: 6028702-6040388 Capsella rubella
Carub.0001s1719 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6030389-6040388 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026796 5273 Angiosperm View MSA
122373910 5261 Brassicaceae View MSA
123837181 5264 Brassicales-Malvales View MSA
124344749 5266 SBM View MSA
124244289 5268 Malvidae View MSA
124064864 5270 Rosid View MSA
123739355 5271 Pentapetalae View MSA
122769951 5272 Eudicot View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain