Gene : Carub.0001s1724 C. rubella v1.1

Defline:  (1 of 3) K06944 - uncharacterized protein (K06944) Genomic Order:  1724
Name:  ? Carub.0001s1724 Secondary Identifier:  ? PAC:39231536

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1724 0.5kb upstream 0.5kb upstream 3873 true scaffold_1: 6049248-6053120 Capsella rubella
Carub.0001s1724 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6049248-6049747 Capsella rubella
Carub.0001s1724 0.5kb downstream 0.5kb downstream 3873 true scaffold_1: 6049748-6053620 Capsella rubella
Carub.0001s1724 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6053121-6053620 Capsella rubella
Carub.0001s1724 1.0kb upstream 1.0kb upstream 4373 true scaffold_1: 6048748-6053120 Capsella rubella
Carub.0001s1724 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6048748-6049747 Capsella rubella
Carub.0001s1724 1.0kb downstream 1.0kb downstream 4373 true scaffold_1: 6049748-6054120 Capsella rubella
Carub.0001s1724 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6053121-6054120 Capsella rubella
Carub.0001s1724 2.0kb upstream 2.0kb upstream 5373 true scaffold_1: 6047748-6053120 Capsella rubella
Carub.0001s1724 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6047748-6049747 Capsella rubella
Carub.0001s1724 2.0kb downstream 2.0kb downstream 5373 true scaffold_1: 6049748-6055120 Capsella rubella
Carub.0001s1724 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6053121-6055120 Capsella rubella
Carub.0001s1724 5.0kb upstream 5.0kb upstream 8373 true scaffold_1: 6044748-6053120 Capsella rubella
Carub.0001s1724 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6044748-6049747 Capsella rubella
Carub.0001s1724 5.0kb downstream 5.0kb downstream 8373 true scaffold_1: 6049748-6058120 Capsella rubella
Carub.0001s1724 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6053121-6058120 Capsella rubella
Carub.0001s1724 10.0kb upstream 10.0kb upstream 13373 true scaffold_1: 6039748-6053120 Capsella rubella
Carub.0001s1724 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6039748-6049747 Capsella rubella
Carub.0001s1724 10.0kb downstream 10.0kb downstream 13373 true scaffold_1: 6049748-6063120 Capsella rubella
Carub.0001s1724 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6053121-6063120 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376674 5261 Brassicaceae View MSA
123838675 5264 Brassicales-Malvales View MSA
124345880 5266 SBM View MSA
124249338 5268 Malvidae View MSA
124060753 5270 Rosid View MSA
123751218 5271 Pentapetalae View MSA
122792375 5272 Eudicot View MSA
122045858 5273 Angiosperm View MSA
121347385 5274 Embryophyte View MSA
123424209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain