Gene : Carub.0001s1781 C. rubella v1.1
Defline:  (1 of 2) PTHR10516:SF308 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP17-2, CHLOROPLASTIC-RELATED Genomic Order:  1781
Name:  ? Carub.0001s1781 Secondary Identifier:  ? PAC:39229142
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1781 0.5kb upstream 0.5kb upstream 1737 true scaffold_1: 6273022-6274758 Capsella rubella
Carub.0001s1781 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6273022-6273521 Capsella rubella
Carub.0001s1781 0.5kb downstream 0.5kb downstream 1737 true scaffold_1: 6273522-6275258 Capsella rubella
Carub.0001s1781 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6274759-6275258 Capsella rubella
Carub.0001s1781 1.0kb upstream 1.0kb upstream 2237 true scaffold_1: 6272522-6274758 Capsella rubella
Carub.0001s1781 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6272522-6273521 Capsella rubella
Carub.0001s1781 1.0kb downstream 1.0kb downstream 2237 true scaffold_1: 6273522-6275758 Capsella rubella
Carub.0001s1781 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6274759-6275758 Capsella rubella
Carub.0001s1781 2.0kb upstream 2.0kb upstream 3237 true scaffold_1: 6271522-6274758 Capsella rubella
Carub.0001s1781 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6271522-6273521 Capsella rubella
Carub.0001s1781 2.0kb downstream 2.0kb downstream 3237 true scaffold_1: 6273522-6276758 Capsella rubella
Carub.0001s1781 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6274759-6276758 Capsella rubella
Carub.0001s1781 5.0kb upstream 5.0kb upstream 6237 true scaffold_1: 6268522-6274758 Capsella rubella
Carub.0001s1781 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6268522-6273521 Capsella rubella
Carub.0001s1781 5.0kb downstream 5.0kb downstream 6237 true scaffold_1: 6273522-6279758 Capsella rubella
Carub.0001s1781 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6274759-6279758 Capsella rubella
Carub.0001s1781 10.0kb upstream 10.0kb upstream 11237 true scaffold_1: 6263522-6274758 Capsella rubella
Carub.0001s1781 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6263522-6273521 Capsella rubella
Carub.0001s1781 10.0kb downstream 10.0kb downstream 11237 true scaffold_1: 6273522-6284758 Capsella rubella
Carub.0001s1781 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6274759-6284758 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041293 5273 Angiosperm View MSA
122369851 5261 Brassicaceae View MSA
123834523 5264 Brassicales-Malvales View MSA
124342022 5266 SBM View MSA
124237774 5268 Malvidae View MSA
124068387 5270 Rosid View MSA
123740147 5271 Pentapetalae View MSA
122793412 5272 Eudicot View MSA
121344596 5274 Embryophyte View MSA
123424769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain