Gene : Carub.0001s1892 C. rubella v1.1
Defline:  (1 of 2) PTHR13286:SF6 - HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30L Genomic Order:  1892
Name:  ? Carub.0001s1892 Secondary Identifier:  ? PAC:39229025
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1892 0.5kb upstream 0.5kb upstream 3540 true scaffold_1: 6713629-6717168 Capsella rubella
Carub.0001s1892 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6716669-6717168 Capsella rubella
Carub.0001s1892 0.5kb downstream 0.5kb downstream 3540 true scaffold_1: 6713129-6716668 Capsella rubella
Carub.0001s1892 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6713129-6713628 Capsella rubella
Carub.0001s1892 1.0kb upstream 1.0kb upstream 4040 true scaffold_1: 6713629-6717668 Capsella rubella
Carub.0001s1892 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6716669-6717668 Capsella rubella
Carub.0001s1892 1.0kb downstream 1.0kb downstream 4040 true scaffold_1: 6712629-6716668 Capsella rubella
Carub.0001s1892 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6712629-6713628 Capsella rubella
Carub.0001s1892 2.0kb upstream 2.0kb upstream 5040 true scaffold_1: 6713629-6718668 Capsella rubella
Carub.0001s1892 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6716669-6718668 Capsella rubella
Carub.0001s1892 2.0kb downstream 2.0kb downstream 5040 true scaffold_1: 6711629-6716668 Capsella rubella
Carub.0001s1892 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6711629-6713628 Capsella rubella
Carub.0001s1892 5.0kb upstream 5.0kb upstream 8040 true scaffold_1: 6713629-6721668 Capsella rubella
Carub.0001s1892 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6716669-6721668 Capsella rubella
Carub.0001s1892 5.0kb downstream 5.0kb downstream 8040 true scaffold_1: 6708629-6716668 Capsella rubella
Carub.0001s1892 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6708629-6713628 Capsella rubella
Carub.0001s1892 10.0kb upstream 10.0kb upstream 13040 true scaffold_1: 6713629-6726668 Capsella rubella
Carub.0001s1892 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6716669-6726668 Capsella rubella
Carub.0001s1892 10.0kb downstream 10.0kb downstream 13040 true scaffold_1: 6703629-6716668 Capsella rubella
Carub.0001s1892 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6703629-6713628 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370772 5261 Brassicaceae View MSA
123838017 5264 Brassicales-Malvales View MSA
124343590 5266 SBM View MSA
124253540 5268 Malvidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain