Gene : Carub.0001s1920 C. rubella v1.1
Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  1920
Name:  ? Carub.0001s1920 Secondary Identifier:  ? PAC:39230963
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1920 0.5kb upstream 0.5kb upstream 3225 true scaffold_1: 6815183-6818407 Capsella rubella
Carub.0001s1920 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6817908-6818407 Capsella rubella
Carub.0001s1920 0.5kb downstream 0.5kb downstream 3225 true scaffold_1: 6814683-6817907 Capsella rubella
Carub.0001s1920 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6814683-6815182 Capsella rubella
Carub.0001s1920 1.0kb upstream 1.0kb upstream 3725 true scaffold_1: 6815183-6818907 Capsella rubella
Carub.0001s1920 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6817908-6818907 Capsella rubella
Carub.0001s1920 1.0kb downstream 1.0kb downstream 3725 true scaffold_1: 6814183-6817907 Capsella rubella
Carub.0001s1920 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6814183-6815182 Capsella rubella
Carub.0001s1920 2.0kb upstream 2.0kb upstream 4725 true scaffold_1: 6815183-6819907 Capsella rubella
Carub.0001s1920 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6817908-6819907 Capsella rubella
Carub.0001s1920 2.0kb downstream 2.0kb downstream 4725 true scaffold_1: 6813183-6817907 Capsella rubella
Carub.0001s1920 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6813183-6815182 Capsella rubella
Carub.0001s1920 5.0kb upstream 5.0kb upstream 7725 true scaffold_1: 6815183-6822907 Capsella rubella
Carub.0001s1920 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6817908-6822907 Capsella rubella
Carub.0001s1920 5.0kb downstream 5.0kb downstream 7725 true scaffold_1: 6810183-6817907 Capsella rubella
Carub.0001s1920 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6810183-6815182 Capsella rubella
Carub.0001s1920 10.0kb upstream 10.0kb upstream 12725 true scaffold_1: 6815183-6827907 Capsella rubella
Carub.0001s1920 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6817908-6827907 Capsella rubella
Carub.0001s1920 10.0kb downstream 10.0kb downstream 12725 true scaffold_1: 6805183-6817907 Capsella rubella
Carub.0001s1920 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6805183-6815182 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380470 5261 Brassicaceae View MSA
123833088 5264 Brassicales-Malvales View MSA
124345202 5266 SBM View MSA
124242607 5268 Malvidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain