Gene : Carub.0001s1940 C. rubella v1.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF195 - REGULATOR OF CHROMOSOME CONDENSATION // REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEIN Genomic Order:  1940
Name:  ? Carub.0001s1940 Secondary Identifier:  ? PAC:39228399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1940 0.5kb upstream 0.5kb upstream 4162 true scaffold_1: 6923378-6927539 Capsella rubella
Carub.0001s1940 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6927040-6927539 Capsella rubella
Carub.0001s1940 0.5kb downstream 0.5kb downstream 4162 true scaffold_1: 6922878-6927039 Capsella rubella
Carub.0001s1940 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6922878-6923377 Capsella rubella
Carub.0001s1940 1.0kb upstream 1.0kb upstream 4662 true scaffold_1: 6923378-6928039 Capsella rubella
Carub.0001s1940 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6927040-6928039 Capsella rubella
Carub.0001s1940 1.0kb downstream 1.0kb downstream 4662 true scaffold_1: 6922378-6927039 Capsella rubella
Carub.0001s1940 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6922378-6923377 Capsella rubella
Carub.0001s1940 2.0kb upstream 2.0kb upstream 5662 true scaffold_1: 6923378-6929039 Capsella rubella
Carub.0001s1940 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6927040-6929039 Capsella rubella
Carub.0001s1940 2.0kb downstream 2.0kb downstream 5662 true scaffold_1: 6921378-6927039 Capsella rubella
Carub.0001s1940 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6921378-6923377 Capsella rubella
Carub.0001s1940 5.0kb upstream 5.0kb upstream 8662 true scaffold_1: 6923378-6932039 Capsella rubella
Carub.0001s1940 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6927040-6932039 Capsella rubella
Carub.0001s1940 5.0kb downstream 5.0kb downstream 8662 true scaffold_1: 6918378-6927039 Capsella rubella
Carub.0001s1940 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6918378-6923377 Capsella rubella
Carub.0001s1940 10.0kb upstream 10.0kb upstream 13662 true scaffold_1: 6923378-6937039 Capsella rubella
Carub.0001s1940 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6927040-6937039 Capsella rubella
Carub.0001s1940 10.0kb downstream 10.0kb downstream 13662 true scaffold_1: 6913378-6927039 Capsella rubella
Carub.0001s1940 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6913378-6923377 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361453 5261 Brassicaceae View MSA
123834363 5264 Brassicales-Malvales View MSA
124344313 5266 SBM View MSA
124242283 5268 Malvidae View MSA
124062556 5270 Rosid View MSA
123737000 5271 Pentapetalae View MSA
122793857 5272 Eudicot View MSA
122050415 5273 Angiosperm View MSA
121350788 5274 Embryophyte View MSA
123425107 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain