Gene : Carub.0001s1646 C. rubella v1.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  1646
Name:  ? Carub.0001s1646 Secondary Identifier:  ? PAC:39231343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1646 0.5kb upstream 0.5kb upstream 4138 true scaffold_1: 5785713-5789850 Capsella rubella
Carub.0001s1646 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5785713-5786212 Capsella rubella
Carub.0001s1646 0.5kb downstream 0.5kb downstream 4138 true scaffold_1: 5786213-5790350 Capsella rubella
Carub.0001s1646 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5789851-5790350 Capsella rubella
Carub.0001s1646 1.0kb upstream 1.0kb upstream 4638 true scaffold_1: 5785213-5789850 Capsella rubella
Carub.0001s1646 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5785213-5786212 Capsella rubella
Carub.0001s1646 1.0kb downstream 1.0kb downstream 4638 true scaffold_1: 5786213-5790850 Capsella rubella
Carub.0001s1646 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5789851-5790850 Capsella rubella
Carub.0001s1646 2.0kb upstream 2.0kb upstream 5638 true scaffold_1: 5784213-5789850 Capsella rubella
Carub.0001s1646 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5784213-5786212 Capsella rubella
Carub.0001s1646 2.0kb downstream 2.0kb downstream 5638 true scaffold_1: 5786213-5791850 Capsella rubella
Carub.0001s1646 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5789851-5791850 Capsella rubella
Carub.0001s1646 5.0kb upstream 5.0kb upstream 8638 true scaffold_1: 5781213-5789850 Capsella rubella
Carub.0001s1646 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5781213-5786212 Capsella rubella
Carub.0001s1646 5.0kb downstream 5.0kb downstream 8638 true scaffold_1: 5786213-5794850 Capsella rubella
Carub.0001s1646 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5789851-5794850 Capsella rubella
Carub.0001s1646 10.0kb upstream 10.0kb upstream 13638 true scaffold_1: 5776213-5789850 Capsella rubella
Carub.0001s1646 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5776213-5786212 Capsella rubella
Carub.0001s1646 10.0kb downstream 10.0kb downstream 13638 true scaffold_1: 5786213-5799850 Capsella rubella
Carub.0001s1646 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5789851-5799850 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373721 5261 Brassicaceae View MSA
123838625 5264 Brassicales-Malvales View MSA
124340565 5266 SBM View MSA
124242246 5268 Malvidae View MSA
124060991 5270 Rosid View MSA
123739581 5271 Pentapetalae View MSA
122792894 5272 Eudicot View MSA
122046159 5273 Angiosperm View MSA
121349944 5274 Embryophyte View MSA
123424676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain