Gene : Carub.0001s1697 C. rubella v1.1
Defline:  (1 of 1) PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC Genomic Order:  1697
Name:  ? Carub.0001s1697 Secondary Identifier:  ? PAC:39227471
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1697 0.5kb upstream 0.5kb upstream 5770 true scaffold_1: 5941796-5947565 Capsella rubella
Carub.0001s1697 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5941796-5942295 Capsella rubella
Carub.0001s1697 0.5kb downstream 0.5kb downstream 5770 true scaffold_1: 5942296-5948065 Capsella rubella
Carub.0001s1697 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5947566-5948065 Capsella rubella
Carub.0001s1697 1.0kb upstream 1.0kb upstream 6270 true scaffold_1: 5941296-5947565 Capsella rubella
Carub.0001s1697 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5941296-5942295 Capsella rubella
Carub.0001s1697 1.0kb downstream 1.0kb downstream 6270 true scaffold_1: 5942296-5948565 Capsella rubella
Carub.0001s1697 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5947566-5948565 Capsella rubella
Carub.0001s1697 2.0kb upstream 2.0kb upstream 7270 true scaffold_1: 5940296-5947565 Capsella rubella
Carub.0001s1697 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5940296-5942295 Capsella rubella
Carub.0001s1697 2.0kb downstream 2.0kb downstream 7270 true scaffold_1: 5942296-5949565 Capsella rubella
Carub.0001s1697 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5947566-5949565 Capsella rubella
Carub.0001s1697 5.0kb upstream 5.0kb upstream 10270 true scaffold_1: 5937296-5947565 Capsella rubella
Carub.0001s1697 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5937296-5942295 Capsella rubella
Carub.0001s1697 5.0kb downstream 5.0kb downstream 10270 true scaffold_1: 5942296-5952565 Capsella rubella
Carub.0001s1697 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5947566-5952565 Capsella rubella
Carub.0001s1697 10.0kb upstream 10.0kb upstream 15270 true scaffold_1: 5932296-5947565 Capsella rubella
Carub.0001s1697 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5932296-5942295 Capsella rubella
Carub.0001s1697 10.0kb downstream 10.0kb downstream 15270 true scaffold_1: 5942296-5957565 Capsella rubella
Carub.0001s1697 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5947566-5957565 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377103 5261 Brassicaceae View MSA
123831023 5264 Brassicales-Malvales View MSA
124340073 5266 SBM View MSA
124241105 5268 Malvidae View MSA
124065303 5270 Rosid View MSA
123736618 5271 Pentapetalae View MSA
122788902 5272 Eudicot View MSA
122051139 5273 Angiosperm View MSA
121347361 5274 Embryophyte View MSA
123428388 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain