Gene : Carub.0001s1708 C. rubella v1.1

Defline:  (1 of 1) K06950 - uncharacterized protein (K06950) Genomic Order:  1708
Name:  ? Carub.0001s1708 Secondary Identifier:  ? PAC:39228596

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1708 0.5kb upstream 0.5kb upstream 2326 true scaffold_1: 5980197-5982522 Capsella rubella
Carub.0001s1708 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5980197-5980696 Capsella rubella
Carub.0001s1708 0.5kb downstream 0.5kb downstream 2326 true scaffold_1: 5980697-5983022 Capsella rubella
Carub.0001s1708 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5982523-5983022 Capsella rubella
Carub.0001s1708 1.0kb upstream 1.0kb upstream 2826 true scaffold_1: 5979697-5982522 Capsella rubella
Carub.0001s1708 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5979697-5980696 Capsella rubella
Carub.0001s1708 1.0kb downstream 1.0kb downstream 2826 true scaffold_1: 5980697-5983522 Capsella rubella
Carub.0001s1708 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5982523-5983522 Capsella rubella
Carub.0001s1708 2.0kb upstream 2.0kb upstream 3826 true scaffold_1: 5978697-5982522 Capsella rubella
Carub.0001s1708 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5978697-5980696 Capsella rubella
Carub.0001s1708 2.0kb downstream 2.0kb downstream 3826 true scaffold_1: 5980697-5984522 Capsella rubella
Carub.0001s1708 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5982523-5984522 Capsella rubella
Carub.0001s1708 5.0kb upstream 5.0kb upstream 6826 true scaffold_1: 5975697-5982522 Capsella rubella
Carub.0001s1708 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5975697-5980696 Capsella rubella
Carub.0001s1708 5.0kb downstream 5.0kb downstream 6826 true scaffold_1: 5980697-5987522 Capsella rubella
Carub.0001s1708 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5982523-5987522 Capsella rubella
Carub.0001s1708 10.0kb upstream 10.0kb upstream 11826 true scaffold_1: 5970697-5982522 Capsella rubella
Carub.0001s1708 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5970697-5980696 Capsella rubella
Carub.0001s1708 10.0kb downstream 10.0kb downstream 11826 true scaffold_1: 5980697-5992522 Capsella rubella
Carub.0001s1708 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5982523-5992522 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366575 5261 Brassicaceae View MSA
123830554 5264 Brassicales-Malvales View MSA
124342124 5266 SBM View MSA
124238033 5268 Malvidae View MSA
124068985 5270 Rosid View MSA
123739075 5271 Pentapetalae View MSA
122790002 5272 Eudicot View MSA
122047991 5273 Angiosperm View MSA
121346124 5274 Embryophyte View MSA
123423985 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain