Gene : Carub.0001s1834 C. rubella v1.1

Defline:  (1 of 6) PTHR10641:SF471 - MYB TRANSCRIPTION FACTOR Genomic Order:  1834
Name:  ? Carub.0001s1834 Secondary Identifier:  ? PAC:39231669

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1834 0.5kb upstream 0.5kb upstream 2543 true scaffold_1: 6480059-6482601 Capsella rubella
Carub.0001s1834 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6480059-6480558 Capsella rubella
Carub.0001s1834 0.5kb downstream 0.5kb downstream 2543 true scaffold_1: 6480559-6483101 Capsella rubella
Carub.0001s1834 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6482602-6483101 Capsella rubella
Carub.0001s1834 1.0kb upstream 1.0kb upstream 3043 true scaffold_1: 6479559-6482601 Capsella rubella
Carub.0001s1834 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6479559-6480558 Capsella rubella
Carub.0001s1834 1.0kb downstream 1.0kb downstream 3043 true scaffold_1: 6480559-6483601 Capsella rubella
Carub.0001s1834 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6482602-6483601 Capsella rubella
Carub.0001s1834 2.0kb upstream 2.0kb upstream 4043 true scaffold_1: 6478559-6482601 Capsella rubella
Carub.0001s1834 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6478559-6480558 Capsella rubella
Carub.0001s1834 2.0kb downstream 2.0kb downstream 4043 true scaffold_1: 6480559-6484601 Capsella rubella
Carub.0001s1834 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6482602-6484601 Capsella rubella
Carub.0001s1834 5.0kb upstream 5.0kb upstream 7043 true scaffold_1: 6475559-6482601 Capsella rubella
Carub.0001s1834 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6475559-6480558 Capsella rubella
Carub.0001s1834 5.0kb downstream 5.0kb downstream 7043 true scaffold_1: 6480559-6487601 Capsella rubella
Carub.0001s1834 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6482602-6487601 Capsella rubella
Carub.0001s1834 10.0kb upstream 10.0kb upstream 12043 true scaffold_1: 6470559-6482601 Capsella rubella
Carub.0001s1834 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6470559-6480558 Capsella rubella
Carub.0001s1834 10.0kb downstream 10.0kb downstream 12043 true scaffold_1: 6480559-6492601 Capsella rubella
Carub.0001s1834 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6482602-6492601 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511972 5273 Angiosperm View MSA
122379790 5261 Brassicaceae View MSA
123802419 5264 Brassicales-Malvales View MSA
124299615 5266 SBM View MSA
124150982 5268 Malvidae View MSA
123876505 5270 Rosid View MSA
123460173 5271 Pentapetalae View MSA
122495551 5272 Eudicot View MSA
120784998 5274 Embryophyte View MSA
122826874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain