Gene : Carub.0001s1842 C. rubella v1.1
Defline:  (1 of 9) PTHR22937//PTHR22937:SF18 - RING FINGER CONTAINING PROTEIN // F6A14.12 PROTEIN-RELATED Genomic Order:  1842
Name:  ? Carub.0001s1842 Secondary Identifier:  ? PAC:39226949
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-7511 Capsella rubella pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1842 0.5kb upstream 0.5kb upstream 1791 true scaffold_1: 6512715-6514505 Capsella rubella
Carub.0001s1842 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6514006-6514505 Capsella rubella
Carub.0001s1842 0.5kb downstream 0.5kb downstream 1791 true scaffold_1: 6512215-6514005 Capsella rubella
Carub.0001s1842 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6512215-6512714 Capsella rubella
Carub.0001s1842 1.0kb upstream 1.0kb upstream 2291 true scaffold_1: 6512715-6515005 Capsella rubella
Carub.0001s1842 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6514006-6515005 Capsella rubella
Carub.0001s1842 1.0kb downstream 1.0kb downstream 2291 true scaffold_1: 6511715-6514005 Capsella rubella
Carub.0001s1842 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6511715-6512714 Capsella rubella
Carub.0001s1842 2.0kb upstream 2.0kb upstream 3291 true scaffold_1: 6512715-6516005 Capsella rubella
Carub.0001s1842 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6514006-6516005 Capsella rubella
Carub.0001s1842 2.0kb downstream 2.0kb downstream 3291 true scaffold_1: 6510715-6514005 Capsella rubella
Carub.0001s1842 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6510715-6512714 Capsella rubella
Carub.0001s1842 5.0kb upstream 5.0kb upstream 6291 true scaffold_1: 6512715-6519005 Capsella rubella
Carub.0001s1842 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6514006-6519005 Capsella rubella
Carub.0001s1842 5.0kb downstream 5.0kb downstream 6291 true scaffold_1: 6507715-6514005 Capsella rubella
Carub.0001s1842 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6507715-6512714 Capsella rubella
Carub.0001s1842 10.0kb upstream 10.0kb upstream 11291 true scaffold_1: 6512715-6524005 Capsella rubella
Carub.0001s1842 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6514006-6524005 Capsella rubella
Carub.0001s1842 10.0kb downstream 10.0kb downstream 11291 true scaffold_1: 6502715-6514005 Capsella rubella
Carub.0001s1842 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6502715-6512714 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122337751 5261 Brassicaceae View MSA
123837858 5264 Brassicales-Malvales View MSA
124347162 5266 SBM View MSA
124254220 5268 Malvidae View MSA
124074172 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain