Gene : Carub.0001s1855 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1855
Name:  ? Carub.0001s1855 Secondary Identifier:  ? PAC:39230673
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1855 0.5kb upstream 0.5kb upstream 4071 true scaffold_1: 6567114-6571184 Capsella rubella
Carub.0001s1855 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6567114-6567613 Capsella rubella
Carub.0001s1855 0.5kb downstream 0.5kb downstream 4071 true scaffold_1: 6567614-6571684 Capsella rubella
Carub.0001s1855 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6571185-6571684 Capsella rubella
Carub.0001s1855 1.0kb upstream 1.0kb upstream 4571 true scaffold_1: 6566614-6571184 Capsella rubella
Carub.0001s1855 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6566614-6567613 Capsella rubella
Carub.0001s1855 1.0kb downstream 1.0kb downstream 4571 true scaffold_1: 6567614-6572184 Capsella rubella
Carub.0001s1855 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6571185-6572184 Capsella rubella
Carub.0001s1855 2.0kb upstream 2.0kb upstream 5571 true scaffold_1: 6565614-6571184 Capsella rubella
Carub.0001s1855 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6565614-6567613 Capsella rubella
Carub.0001s1855 2.0kb downstream 2.0kb downstream 5571 true scaffold_1: 6567614-6573184 Capsella rubella
Carub.0001s1855 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6571185-6573184 Capsella rubella
Carub.0001s1855 5.0kb upstream 5.0kb upstream 8571 true scaffold_1: 6562614-6571184 Capsella rubella
Carub.0001s1855 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6562614-6567613 Capsella rubella
Carub.0001s1855 5.0kb downstream 5.0kb downstream 8571 true scaffold_1: 6567614-6576184 Capsella rubella
Carub.0001s1855 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6571185-6576184 Capsella rubella
Carub.0001s1855 10.0kb upstream 10.0kb upstream 13571 true scaffold_1: 6557614-6571184 Capsella rubella
Carub.0001s1855 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6557614-6567613 Capsella rubella
Carub.0001s1855 10.0kb downstream 10.0kb downstream 13571 true scaffold_1: 6567614-6581184 Capsella rubella
Carub.0001s1855 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6571185-6581184 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375002 5261 Brassicaceae View MSA
123800861 5264 Brassicales-Malvales View MSA
124350713 5266 SBM View MSA
124239510 5268 Malvidae View MSA
124066157 5270 Rosid View MSA
123739123 5271 Pentapetalae View MSA
122794218 5272 Eudicot View MSA
122042407 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121350963 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain