Gene : Carub.0001s1866 C. rubella v1.1
Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1866
Name:  ? Carub.0001s1866 Secondary Identifier:  ? PAC:39229131
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s1866 0.5kb upstream 0.5kb upstream 2661 true scaffold_1: 6604698-6607358 Capsella rubella
Carub.0001s1866 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6604698-6605197 Capsella rubella
Carub.0001s1866 0.5kb downstream 0.5kb downstream 2661 true scaffold_1: 6605198-6607858 Capsella rubella
Carub.0001s1866 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6607359-6607858 Capsella rubella
Carub.0001s1866 1.0kb upstream 1.0kb upstream 3161 true scaffold_1: 6604198-6607358 Capsella rubella
Carub.0001s1866 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6604198-6605197 Capsella rubella
Carub.0001s1866 1.0kb downstream 1.0kb downstream 3161 true scaffold_1: 6605198-6608358 Capsella rubella
Carub.0001s1866 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6607359-6608358 Capsella rubella
Carub.0001s1866 2.0kb upstream 2.0kb upstream 4161 true scaffold_1: 6603198-6607358 Capsella rubella
Carub.0001s1866 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6603198-6605197 Capsella rubella
Carub.0001s1866 2.0kb downstream 2.0kb downstream 4161 true scaffold_1: 6605198-6609358 Capsella rubella
Carub.0001s1866 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6607359-6609358 Capsella rubella
Carub.0001s1866 5.0kb upstream 5.0kb upstream 7161 true scaffold_1: 6600198-6607358 Capsella rubella
Carub.0001s1866 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6600198-6605197 Capsella rubella
Carub.0001s1866 5.0kb downstream 5.0kb downstream 7161 true scaffold_1: 6605198-6612358 Capsella rubella
Carub.0001s1866 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6607359-6612358 Capsella rubella
Carub.0001s1866 10.0kb upstream 10.0kb upstream 12161 true scaffold_1: 6595198-6607358 Capsella rubella
Carub.0001s1866 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6595198-6605197 Capsella rubella
Carub.0001s1866 10.0kb downstream 10.0kb downstream 12161 true scaffold_1: 6605198-6617358 Capsella rubella
Carub.0001s1866 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6607359-6617358 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365926 5261 Brassicaceae View MSA
123833863 5264 Brassicales-Malvales View MSA
124336941 5266 SBM View MSA
124239407 5268 Malvidae View MSA
124068668 5270 Rosid View MSA
123740105 5271 Pentapetalae View MSA
122792386 5272 Eudicot View MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain