Gene : Carub.0005s2783 C. rubella v1.1
Defline:  (1 of 11) PTHR33830//PTHR33830:SF3 - FAMILY NOT NAMED // DEFENSIN-LIKE PROTEIN 122-RELATED Genomic Order:  2783
Name:  ? Carub.0005s2783 Secondary Identifier:  ? PAC:39224924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2783 0.5kb upstream 0.5kb upstream 6632 true scaffold_5: 12854845-12861476 Capsella rubella
Carub.0005s2783 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12860977-12861476 Capsella rubella
Carub.0005s2783 0.5kb downstream 0.5kb downstream 6632 true scaffold_5: 12854345-12860976 Capsella rubella
Carub.0005s2783 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12854345-12854844 Capsella rubella
Carub.0005s2783 1.0kb upstream 1.0kb upstream 7132 true scaffold_5: 12854845-12861976 Capsella rubella
Carub.0005s2783 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12860977-12861976 Capsella rubella
Carub.0005s2783 1.0kb downstream 1.0kb downstream 7132 true scaffold_5: 12853845-12860976 Capsella rubella
Carub.0005s2783 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12853845-12854844 Capsella rubella
Carub.0005s2783 2.0kb upstream 2.0kb upstream 8132 true scaffold_5: 12854845-12862976 Capsella rubella
Carub.0005s2783 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12860977-12862976 Capsella rubella
Carub.0005s2783 2.0kb downstream 2.0kb downstream 8132 true scaffold_5: 12852845-12860976 Capsella rubella
Carub.0005s2783 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12852845-12854844 Capsella rubella
Carub.0005s2783 5.0kb upstream 5.0kb upstream 11132 true scaffold_5: 12854845-12865976 Capsella rubella
Carub.0005s2783 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12860977-12865976 Capsella rubella
Carub.0005s2783 5.0kb downstream 5.0kb downstream 11132 true scaffold_5: 12849845-12860976 Capsella rubella
Carub.0005s2783 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12849845-12854844 Capsella rubella
Carub.0005s2783 10.0kb upstream 10.0kb upstream 16132 true scaffold_5: 12854845-12870976 Capsella rubella
Carub.0005s2783 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12860977-12870976 Capsella rubella
Carub.0005s2783 10.0kb downstream 10.0kb downstream 16132 true scaffold_5: 12844845-12860976 Capsella rubella
Carub.0005s2783 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12844845-12854844 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792133 5273 Angiosperm View MSA
122377960 5261 Brassicaceae View MSA
123836573 5264 Brassicales-Malvales View MSA
124322184 5266 SBM View MSA
124251397 5268 Malvidae View MSA
124067401 5270 Rosid View MSA
123743891 5271 Pentapetalae View MSA
122796538 5272 Eudicot View MSA
121063384 5274 Embryophyte View MSA
123103137 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain