Gene : Carub.0005s2787 C. rubella v1.1
Defline:  (1 of 1) PTHR21660//PTHR21660:SF12 - THIOESTERASE SUPERFAMILY MEMBER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2787
Name:  ? Carub.0005s2787 Secondary Identifier:  ? PAC:39223794
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-1121 Capsella rubella pathologic  
Crubella PWY-321 Capsella rubella pathologic  
Crubella PWY-5148 Capsella rubella pathologic  
Crubella PWY-6733 Capsella rubella pathologic  
Crubella PWY-735 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2787 0.5kb upstream 0.5kb upstream 1375 true scaffold_5: 12882186-12883560 Capsella rubella
Carub.0005s2787 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12883061-12883560 Capsella rubella
Carub.0005s2787 0.5kb downstream 0.5kb downstream 1375 true scaffold_5: 12881686-12883060 Capsella rubella
Carub.0005s2787 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12881686-12882185 Capsella rubella
Carub.0005s2787 1.0kb upstream 1.0kb upstream 1875 true scaffold_5: 12882186-12884060 Capsella rubella
Carub.0005s2787 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12883061-12884060 Capsella rubella
Carub.0005s2787 1.0kb downstream 1.0kb downstream 1875 true scaffold_5: 12881186-12883060 Capsella rubella
Carub.0005s2787 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12881186-12882185 Capsella rubella
Carub.0005s2787 2.0kb upstream 2.0kb upstream 2875 true scaffold_5: 12882186-12885060 Capsella rubella
Carub.0005s2787 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12883061-12885060 Capsella rubella
Carub.0005s2787 2.0kb downstream 2.0kb downstream 2875 true scaffold_5: 12880186-12883060 Capsella rubella
Carub.0005s2787 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12880186-12882185 Capsella rubella
Carub.0005s2787 5.0kb upstream 5.0kb upstream 5875 true scaffold_5: 12882186-12888060 Capsella rubella
Carub.0005s2787 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12883061-12888060 Capsella rubella
Carub.0005s2787 5.0kb downstream 5.0kb downstream 5875 true scaffold_5: 12877186-12883060 Capsella rubella
Carub.0005s2787 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12877186-12882185 Capsella rubella
Carub.0005s2787 10.0kb upstream 10.0kb upstream 10875 true scaffold_5: 12882186-12893060 Capsella rubella
Carub.0005s2787 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12883061-12893060 Capsella rubella
Carub.0005s2787 10.0kb downstream 10.0kb downstream 10875 true scaffold_5: 12872186-12883060 Capsella rubella
Carub.0005s2787 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12872186-12882185 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363895 5261 Brassicaceae View MSA
123827579 5264 Brassicales-Malvales View MSA
124351057 5266 SBM View MSA
124244489 5268 Malvidae View MSA
124063594 5270 Rosid View MSA
123749451 5271 Pentapetalae View MSA
122793773 5272 Eudicot View MSA
122044050 5273 Angiosperm View MSA
121310231 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain