Gene : Carub.0001s3885 C. rubella v1.1
Defline:  (1 of 4) PTHR23024//PTHR23024:SF131 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 2-RELATED Genomic Order:  3885
Name:  ? Carub.0001s3885 Secondary Identifier:  ? PAC:39228989
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3885 0.5kb upstream 0.5kb upstream 1628 true scaffold_1: 17127090-17128717 Capsella rubella
Carub.0001s3885 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17128218-17128717 Capsella rubella
Carub.0001s3885 0.5kb downstream 0.5kb downstream 1628 true scaffold_1: 17126590-17128217 Capsella rubella
Carub.0001s3885 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17126590-17127089 Capsella rubella
Carub.0001s3885 1.0kb upstream 1.0kb upstream 2128 true scaffold_1: 17127090-17129217 Capsella rubella
Carub.0001s3885 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17128218-17129217 Capsella rubella
Carub.0001s3885 1.0kb downstream 1.0kb downstream 2128 true scaffold_1: 17126090-17128217 Capsella rubella
Carub.0001s3885 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17126090-17127089 Capsella rubella
Carub.0001s3885 2.0kb upstream 2.0kb upstream 3128 true scaffold_1: 17127090-17130217 Capsella rubella
Carub.0001s3885 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17128218-17130217 Capsella rubella
Carub.0001s3885 2.0kb downstream 2.0kb downstream 3128 true scaffold_1: 17125090-17128217 Capsella rubella
Carub.0001s3885 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17125090-17127089 Capsella rubella
Carub.0001s3885 5.0kb upstream 5.0kb upstream 6128 true scaffold_1: 17127090-17133217 Capsella rubella
Carub.0001s3885 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17128218-17133217 Capsella rubella
Carub.0001s3885 5.0kb downstream 5.0kb downstream 6128 true scaffold_1: 17122090-17128217 Capsella rubella
Carub.0001s3885 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17122090-17127089 Capsella rubella
Carub.0001s3885 10.0kb upstream 10.0kb upstream 11128 true scaffold_1: 17127090-17138217 Capsella rubella
Carub.0001s3885 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17128218-17138217 Capsella rubella
Carub.0001s3885 10.0kb downstream 10.0kb downstream 11128 true scaffold_1: 17117090-17128217 Capsella rubella
Carub.0001s3885 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17117090-17127089 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369611 5261 Brassicaceae View MSA
123799810 5264 Brassicales-Malvales View MSA
124297294 5266 SBM View MSA
124252668 5268 Malvidae View MSA
124074680 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain