Gene : Carub.0001s3884 C. rubella v1.1
Defline:  (1 of 4) PTHR23024//PTHR23024:SF131 - MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES // CARBOXYLESTERASE 2-RELATED Genomic Order:  3884
Name:  ? Carub.0001s3884 Secondary Identifier:  ? PAC:39228465
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6303 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3884 0.5kb upstream 0.5kb upstream 1550 true scaffold_1: 17125246-17126795 Capsella rubella
Carub.0001s3884 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17126296-17126795 Capsella rubella
Carub.0001s3884 0.5kb downstream 0.5kb downstream 1550 true scaffold_1: 17124746-17126295 Capsella rubella
Carub.0001s3884 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17124746-17125245 Capsella rubella
Carub.0001s3884 1.0kb upstream 1.0kb upstream 2050 true scaffold_1: 17125246-17127295 Capsella rubella
Carub.0001s3884 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17126296-17127295 Capsella rubella
Carub.0001s3884 1.0kb downstream 1.0kb downstream 2050 true scaffold_1: 17124246-17126295 Capsella rubella
Carub.0001s3884 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17124246-17125245 Capsella rubella
Carub.0001s3884 2.0kb upstream 2.0kb upstream 3050 true scaffold_1: 17125246-17128295 Capsella rubella
Carub.0001s3884 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17126296-17128295 Capsella rubella
Carub.0001s3884 2.0kb downstream 2.0kb downstream 3050 true scaffold_1: 17123246-17126295 Capsella rubella
Carub.0001s3884 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17123246-17125245 Capsella rubella
Carub.0001s3884 5.0kb upstream 5.0kb upstream 6050 true scaffold_1: 17125246-17131295 Capsella rubella
Carub.0001s3884 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17126296-17131295 Capsella rubella
Carub.0001s3884 5.0kb downstream 5.0kb downstream 6050 true scaffold_1: 17120246-17126295 Capsella rubella
Carub.0001s3884 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17120246-17125245 Capsella rubella
Carub.0001s3884 10.0kb upstream 10.0kb upstream 11050 true scaffold_1: 17125246-17136295 Capsella rubella
Carub.0001s3884 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17126296-17136295 Capsella rubella
Carub.0001s3884 10.0kb downstream 10.0kb downstream 11050 true scaffold_1: 17115246-17126295 Capsella rubella
Carub.0001s3884 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17115246-17125245 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380868 5261 Brassicaceae View MSA
123802942 5264 Brassicales-Malvales View MSA
124300091 5266 SBM View MSA
124151355 5268 Malvidae View MSA
124052112 5270 Rosid View MSA
123751829 5271 Pentapetalae View MSA
122797555 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain