Gene : Carub.0001s3917 C. rubella v1.1

Defline:  (1 of 1) K03511 - DNA polymerase kappa (POLK) Genomic Order:  3917
Name:  ? Carub.0001s3917 Secondary Identifier:  ? PAC:39230939

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3917 0.5kb upstream 0.5kb upstream 4678 true scaffold_1: 17240216-17244893 Capsella rubella
Carub.0001s3917 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17240216-17240715 Capsella rubella
Carub.0001s3917 0.5kb downstream 0.5kb downstream 4678 true scaffold_1: 17240716-17245393 Capsella rubella
Carub.0001s3917 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17244894-17245393 Capsella rubella
Carub.0001s3917 1.0kb upstream 1.0kb upstream 5178 true scaffold_1: 17239716-17244893 Capsella rubella
Carub.0001s3917 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17239716-17240715 Capsella rubella
Carub.0001s3917 1.0kb downstream 1.0kb downstream 5178 true scaffold_1: 17240716-17245893 Capsella rubella
Carub.0001s3917 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17244894-17245893 Capsella rubella
Carub.0001s3917 2.0kb upstream 2.0kb upstream 6178 true scaffold_1: 17238716-17244893 Capsella rubella
Carub.0001s3917 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17238716-17240715 Capsella rubella
Carub.0001s3917 2.0kb downstream 2.0kb downstream 6178 true scaffold_1: 17240716-17246893 Capsella rubella
Carub.0001s3917 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17244894-17246893 Capsella rubella
Carub.0001s3917 5.0kb upstream 5.0kb upstream 9178 true scaffold_1: 17235716-17244893 Capsella rubella
Carub.0001s3917 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17235716-17240715 Capsella rubella
Carub.0001s3917 5.0kb downstream 5.0kb downstream 9178 true scaffold_1: 17240716-17249893 Capsella rubella
Carub.0001s3917 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17244894-17249893 Capsella rubella
Carub.0001s3917 10.0kb upstream 10.0kb upstream 14178 true scaffold_1: 17230716-17244893 Capsella rubella
Carub.0001s3917 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17230716-17240715 Capsella rubella
Carub.0001s3917 10.0kb downstream 10.0kb downstream 14178 true scaffold_1: 17240716-17254893 Capsella rubella
Carub.0001s3917 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17244894-17254893 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372893 5261 Brassicaceae View MSA
123831351 5264 Brassicales-Malvales View MSA
124339178 5266 SBM View MSA
124241594 5268 Malvidae View MSA
124064491 5270 Rosid View MSA
123752653 5271 Pentapetalae View MSA
122794532 5272 Eudicot View MSA
122043377 5273 Angiosperm View MSA
121348384 5274 Embryophyte View MSA
123428686 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain