Gene : Carub.0001s3950 C. rubella v1.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  3950
Name:  ? Carub.0001s3950 Secondary Identifier:  ? PAC:39228867
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2541 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3950 0.5kb upstream 0.5kb upstream 4269 true scaffold_1: 17412650-17416918 Capsella rubella
Carub.0001s3950 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17416419-17416918 Capsella rubella
Carub.0001s3950 0.5kb downstream 0.5kb downstream 4269 true scaffold_1: 17412150-17416418 Capsella rubella
Carub.0001s3950 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17412150-17412649 Capsella rubella
Carub.0001s3950 1.0kb upstream 1.0kb upstream 4769 true scaffold_1: 17412650-17417418 Capsella rubella
Carub.0001s3950 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17416419-17417418 Capsella rubella
Carub.0001s3950 1.0kb downstream 1.0kb downstream 4769 true scaffold_1: 17411650-17416418 Capsella rubella
Carub.0001s3950 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17411650-17412649 Capsella rubella
Carub.0001s3950 2.0kb upstream 2.0kb upstream 5769 true scaffold_1: 17412650-17418418 Capsella rubella
Carub.0001s3950 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17416419-17418418 Capsella rubella
Carub.0001s3950 2.0kb downstream 2.0kb downstream 5769 true scaffold_1: 17410650-17416418 Capsella rubella
Carub.0001s3950 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17410650-17412649 Capsella rubella
Carub.0001s3950 5.0kb upstream 5.0kb upstream 8769 true scaffold_1: 17412650-17421418 Capsella rubella
Carub.0001s3950 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17416419-17421418 Capsella rubella
Carub.0001s3950 5.0kb downstream 5.0kb downstream 8769 true scaffold_1: 17407650-17416418 Capsella rubella
Carub.0001s3950 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17407650-17412649 Capsella rubella
Carub.0001s3950 10.0kb upstream 10.0kb upstream 13769 true scaffold_1: 17412650-17426418 Capsella rubella
Carub.0001s3950 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17416419-17426418 Capsella rubella
Carub.0001s3950 10.0kb downstream 10.0kb downstream 13769 true scaffold_1: 17402650-17416418 Capsella rubella
Carub.0001s3950 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17402650-17412649 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367905 5261 Brassicaceae View MSA
123831848 5264 Brassicales-Malvales View MSA
124345945 5266 SBM View MSA
124241398 5268 Malvidae View MSA
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain