Gene : Carub.0001s3611 C. rubella v1.1
Defline:  (1 of 2) 3.5.2.3 - Dihydroorotase / DHOase Genomic Order:  3611
Name:  ? Carub.0001s3611 Secondary Identifier:  ? PAC:39231529
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-162 Capsella rubella pathologic  
Crubella PWY-5686 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3611 0.5kb upstream 0.5kb upstream 3363 true scaffold_1: 15806857-15810219 Capsella rubella
Carub.0001s3611 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15809720-15810219 Capsella rubella
Carub.0001s3611 0.5kb downstream 0.5kb downstream 3363 true scaffold_1: 15806357-15809719 Capsella rubella
Carub.0001s3611 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15806357-15806856 Capsella rubella
Carub.0001s3611 1.0kb upstream 1.0kb upstream 3863 true scaffold_1: 15806857-15810719 Capsella rubella
Carub.0001s3611 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15809720-15810719 Capsella rubella
Carub.0001s3611 1.0kb downstream 1.0kb downstream 3863 true scaffold_1: 15805857-15809719 Capsella rubella
Carub.0001s3611 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15805857-15806856 Capsella rubella
Carub.0001s3611 2.0kb upstream 2.0kb upstream 4863 true scaffold_1: 15806857-15811719 Capsella rubella
Carub.0001s3611 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15809720-15811719 Capsella rubella
Carub.0001s3611 2.0kb downstream 2.0kb downstream 4863 true scaffold_1: 15804857-15809719 Capsella rubella
Carub.0001s3611 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15804857-15806856 Capsella rubella
Carub.0001s3611 5.0kb upstream 5.0kb upstream 7863 true scaffold_1: 15806857-15814719 Capsella rubella
Carub.0001s3611 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15809720-15814719 Capsella rubella
Carub.0001s3611 5.0kb downstream 5.0kb downstream 7863 true scaffold_1: 15801857-15809719 Capsella rubella
Carub.0001s3611 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15801857-15806856 Capsella rubella
Carub.0001s3611 10.0kb upstream 10.0kb upstream 12863 true scaffold_1: 15806857-15819719 Capsella rubella
Carub.0001s3611 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15809720-15819719 Capsella rubella
Carub.0001s3611 10.0kb downstream 10.0kb downstream 12863 true scaffold_1: 15796857-15809719 Capsella rubella
Carub.0001s3611 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15796857-15806856 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041185 5273 Angiosperm View MSA
122376785 5261 Brassicaceae View MSA
123831700 5264 Brassicales-Malvales View MSA
124344781 5266 SBM View MSA
124237348 5268 Malvidae View MSA
124067769 5270 Rosid View MSA
123751571 5271 Pentapetalae View MSA
122786847 5272 Eudicot View MSA
121347415 5274 Embryophyte View MSA
123424223 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain