Gene : Carub.0001s3497 C. rubella v1.1
Defline:  (1 of 85) PF03478 - Protein of unknown function (DUF295) (DUF295) Genomic Order:  3497
Name:  ? Carub.0001s3497 Secondary Identifier:  ? PAC:39228187
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3497 0.5kb upstream 0.5kb upstream 1636 true scaffold_1: 15116999-15118634 Capsella rubella
Carub.0001s3497 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15118135-15118634 Capsella rubella
Carub.0001s3497 0.5kb downstream 0.5kb downstream 1636 true scaffold_1: 15116499-15118134 Capsella rubella
Carub.0001s3497 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15116499-15116998 Capsella rubella
Carub.0001s3497 1.0kb upstream 1.0kb upstream 2136 true scaffold_1: 15116999-15119134 Capsella rubella
Carub.0001s3497 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15118135-15119134 Capsella rubella
Carub.0001s3497 1.0kb downstream 1.0kb downstream 2136 true scaffold_1: 15115999-15118134 Capsella rubella
Carub.0001s3497 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15115999-15116998 Capsella rubella
Carub.0001s3497 2.0kb upstream 2.0kb upstream 3136 true scaffold_1: 15116999-15120134 Capsella rubella
Carub.0001s3497 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15118135-15120134 Capsella rubella
Carub.0001s3497 2.0kb downstream 2.0kb downstream 3136 true scaffold_1: 15114999-15118134 Capsella rubella
Carub.0001s3497 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15114999-15116998 Capsella rubella
Carub.0001s3497 5.0kb upstream 5.0kb upstream 6136 true scaffold_1: 15116999-15123134 Capsella rubella
Carub.0001s3497 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15118135-15123134 Capsella rubella
Carub.0001s3497 5.0kb downstream 5.0kb downstream 6136 true scaffold_1: 15111999-15118134 Capsella rubella
Carub.0001s3497 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15111999-15116998 Capsella rubella
Carub.0001s3497 10.0kb upstream 10.0kb upstream 11136 true scaffold_1: 15116999-15128134 Capsella rubella
Carub.0001s3497 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15118135-15128134 Capsella rubella
Carub.0001s3497 10.0kb downstream 10.0kb downstream 11136 true scaffold_1: 15106999-15118134 Capsella rubella
Carub.0001s3497 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15106999-15116998 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364386 5261 Brassicaceae View MSA
123798745 5264 Brassicales-Malvales View MSA
124296341 5266 SBM View MSA
124148518 5268 Malvidae View MSA
124038282 5270 Rosid View MSA
123753146 5271 Pentapetalae View MSA
122797944 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain