Gene : Carub.0001s3500 C. rubella v1.1
Defline:  (1 of 2) 4.2.3.19 - Ent-kaurene synthase / Ent-kaurene synthetase B Genomic Order:  3500
Name:  ? Carub.0001s3500 Secondary Identifier:  ? PAC:39231365
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5032 Capsella rubella pathologic  
Crubella PWY-5053 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3500 0.5kb upstream 0.5kb upstream 2351 true scaffold_1: 15133538-15135888 Capsella rubella
Carub.0001s3500 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15135389-15135888 Capsella rubella
Carub.0001s3500 0.5kb downstream 0.5kb downstream 2351 true scaffold_1: 15133038-15135388 Capsella rubella
Carub.0001s3500 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15133038-15133537 Capsella rubella
Carub.0001s3500 1.0kb upstream 1.0kb upstream 2851 true scaffold_1: 15133538-15136388 Capsella rubella
Carub.0001s3500 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15135389-15136388 Capsella rubella
Carub.0001s3500 1.0kb downstream 1.0kb downstream 2851 true scaffold_1: 15132538-15135388 Capsella rubella
Carub.0001s3500 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15132538-15133537 Capsella rubella
Carub.0001s3500 2.0kb upstream 2.0kb upstream 3851 true scaffold_1: 15133538-15137388 Capsella rubella
Carub.0001s3500 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15135389-15137388 Capsella rubella
Carub.0001s3500 2.0kb downstream 2.0kb downstream 3851 true scaffold_1: 15131538-15135388 Capsella rubella
Carub.0001s3500 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15131538-15133537 Capsella rubella
Carub.0001s3500 5.0kb upstream 5.0kb upstream 6851 true scaffold_1: 15133538-15140388 Capsella rubella
Carub.0001s3500 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15135389-15140388 Capsella rubella
Carub.0001s3500 5.0kb downstream 5.0kb downstream 6851 true scaffold_1: 15128538-15135388 Capsella rubella
Carub.0001s3500 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15128538-15133537 Capsella rubella
Carub.0001s3500 10.0kb upstream 10.0kb upstream 11851 true scaffold_1: 15133538-15145388 Capsella rubella
Carub.0001s3500 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15135389-15145388 Capsella rubella
Carub.0001s3500 10.0kb downstream 10.0kb downstream 11851 true scaffold_1: 15123538-15135388 Capsella rubella
Carub.0001s3500 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15123538-15133537 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372283 5261 Brassicaceae View MSA
123833310 5264 Brassicales-Malvales View MSA
124351190 5266 SBM View MSA
124247036 5268 Malvidae View MSA
124071388 5270 Rosid View MSA
123748774 5271 Pentapetalae View MSA
122795776 5272 Eudicot View MSA
122047405 5273 Angiosperm View MSA
121349233 5274 Embryophyte View MSA
123381227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain