Gene : Carub.0005s2798 C. rubella v1.1
Defline:  (1 of 2) PTHR31500:SF10 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2798
Name:  ? Carub.0005s2798 Secondary Identifier:  ? PAC:39223732
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0005s2798 0.5kb upstream 0.5kb upstream 3090 true scaffold_5: 12920576-12923665 Capsella rubella
Carub.0005s2798 0.5kb upstream 0.5kb upstream 500 false scaffold_5: 12923166-12923665 Capsella rubella
Carub.0005s2798 0.5kb downstream 0.5kb downstream 3090 true scaffold_5: 12920076-12923165 Capsella rubella
Carub.0005s2798 0.5kb downstream 0.5kb downstream 500 false scaffold_5: 12920076-12920575 Capsella rubella
Carub.0005s2798 1.0kb upstream 1.0kb upstream 3590 true scaffold_5: 12920576-12924165 Capsella rubella
Carub.0005s2798 1.0kb upstream 1.0kb upstream 1000 false scaffold_5: 12923166-12924165 Capsella rubella
Carub.0005s2798 1.0kb downstream 1.0kb downstream 3590 true scaffold_5: 12919576-12923165 Capsella rubella
Carub.0005s2798 1.0kb downstream 1.0kb downstream 1000 false scaffold_5: 12919576-12920575 Capsella rubella
Carub.0005s2798 2.0kb upstream 2.0kb upstream 4590 true scaffold_5: 12920576-12925165 Capsella rubella
Carub.0005s2798 2.0kb upstream 2.0kb upstream 2000 false scaffold_5: 12923166-12925165 Capsella rubella
Carub.0005s2798 2.0kb downstream 2.0kb downstream 4590 true scaffold_5: 12918576-12923165 Capsella rubella
Carub.0005s2798 2.0kb downstream 2.0kb downstream 2000 false scaffold_5: 12918576-12920575 Capsella rubella
Carub.0005s2798 5.0kb upstream 5.0kb upstream 7590 true scaffold_5: 12920576-12928165 Capsella rubella
Carub.0005s2798 5.0kb upstream 5.0kb upstream 5000 false scaffold_5: 12923166-12928165 Capsella rubella
Carub.0005s2798 5.0kb downstream 5.0kb downstream 7590 true scaffold_5: 12915576-12923165 Capsella rubella
Carub.0005s2798 5.0kb downstream 5.0kb downstream 5000 false scaffold_5: 12915576-12920575 Capsella rubella
Carub.0005s2798 10.0kb upstream 10.0kb upstream 12590 true scaffold_5: 12920576-12933165 Capsella rubella
Carub.0005s2798 10.0kb upstream 10.0kb upstream 10000 false scaffold_5: 12923166-12933165 Capsella rubella
Carub.0005s2798 10.0kb downstream 10.0kb downstream 12590 true scaffold_5: 12910576-12923165 Capsella rubella
Carub.0005s2798 10.0kb downstream 10.0kb downstream 10000 false scaffold_5: 12910576-12920575 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
122363187 5261 Brassicaceae View MSA
123837536 5264 Brassicales-Malvales View MSA
124342776 5266 SBM View MSA
124237789 5268 Malvidae View MSA
124064168 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain