Gene : Carub.0001s3516 C. rubella v1.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF62 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Genomic Order:  3516
Name:  ? Carub.0001s3516 Secondary Identifier:  ? PAC:39228259
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3516 0.5kb upstream 0.5kb upstream 4532 true scaffold_1: 15271990-15276521 Capsella rubella
Carub.0001s3516 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15276022-15276521 Capsella rubella
Carub.0001s3516 0.5kb downstream 0.5kb downstream 4532 true scaffold_1: 15271490-15276021 Capsella rubella
Carub.0001s3516 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15271490-15271989 Capsella rubella
Carub.0001s3516 1.0kb upstream 1.0kb upstream 5032 true scaffold_1: 15271990-15277021 Capsella rubella
Carub.0001s3516 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15276022-15277021 Capsella rubella
Carub.0001s3516 1.0kb downstream 1.0kb downstream 5032 true scaffold_1: 15270990-15276021 Capsella rubella
Carub.0001s3516 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15270990-15271989 Capsella rubella
Carub.0001s3516 2.0kb upstream 2.0kb upstream 6032 true scaffold_1: 15271990-15278021 Capsella rubella
Carub.0001s3516 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15276022-15278021 Capsella rubella
Carub.0001s3516 2.0kb downstream 2.0kb downstream 6032 true scaffold_1: 15269990-15276021 Capsella rubella
Carub.0001s3516 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15269990-15271989 Capsella rubella
Carub.0001s3516 5.0kb upstream 5.0kb upstream 9032 true scaffold_1: 15271990-15281021 Capsella rubella
Carub.0001s3516 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15276022-15281021 Capsella rubella
Carub.0001s3516 5.0kb downstream 5.0kb downstream 9032 true scaffold_1: 15266990-15276021 Capsella rubella
Carub.0001s3516 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15266990-15271989 Capsella rubella
Carub.0001s3516 10.0kb upstream 10.0kb upstream 14032 true scaffold_1: 15271990-15286021 Capsella rubella
Carub.0001s3516 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15276022-15286021 Capsella rubella
Carub.0001s3516 10.0kb downstream 10.0kb downstream 14032 true scaffold_1: 15261990-15276021 Capsella rubella
Carub.0001s3516 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15261990-15271989 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370567 5261 Brassicaceae View MSA
123837404 5264 Brassicales-Malvales View MSA
124343593 5266 SBM View MSA
124249745 5268 Malvidae View MSA
124061387 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain