Gene : Carub.0001s3578 C. rubella v1.1
Defline:  (1 of 1) PTHR10044:SF118 - F2G19.2 Genomic Order:  3578
Name:  ? Carub.0001s3578 Secondary Identifier:  ? PAC:39230450
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3578 0.5kb upstream 0.5kb upstream 2003 true scaffold_1: 15664557-15666559 Capsella rubella
Carub.0001s3578 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15664557-15665056 Capsella rubella
Carub.0001s3578 0.5kb downstream 0.5kb downstream 2003 true scaffold_1: 15665057-15667059 Capsella rubella
Carub.0001s3578 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15666560-15667059 Capsella rubella
Carub.0001s3578 1.0kb upstream 1.0kb upstream 2503 true scaffold_1: 15664057-15666559 Capsella rubella
Carub.0001s3578 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15664057-15665056 Capsella rubella
Carub.0001s3578 1.0kb downstream 1.0kb downstream 2503 true scaffold_1: 15665057-15667559 Capsella rubella
Carub.0001s3578 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15666560-15667559 Capsella rubella
Carub.0001s3578 2.0kb upstream 2.0kb upstream 3503 true scaffold_1: 15663057-15666559 Capsella rubella
Carub.0001s3578 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15663057-15665056 Capsella rubella
Carub.0001s3578 2.0kb downstream 2.0kb downstream 3503 true scaffold_1: 15665057-15668559 Capsella rubella
Carub.0001s3578 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15666560-15668559 Capsella rubella
Carub.0001s3578 5.0kb upstream 5.0kb upstream 6503 true scaffold_1: 15660057-15666559 Capsella rubella
Carub.0001s3578 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15660057-15665056 Capsella rubella
Carub.0001s3578 5.0kb downstream 5.0kb downstream 6503 true scaffold_1: 15665057-15671559 Capsella rubella
Carub.0001s3578 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15666560-15671559 Capsella rubella
Carub.0001s3578 10.0kb upstream 10.0kb upstream 11503 true scaffold_1: 15655057-15666559 Capsella rubella
Carub.0001s3578 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15655057-15665056 Capsella rubella
Carub.0001s3578 10.0kb downstream 10.0kb downstream 11503 true scaffold_1: 15665057-15676559 Capsella rubella
Carub.0001s3578 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15666560-15676559 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370930 5261 Brassicaceae View MSA
123840031 5264 Brassicales-Malvales View MSA
124344721 5266 SBM View MSA
124250800 5268 Malvidae View MSA
124065103 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain