Gene : Carub.0001s3307 C. rubella v1.1
Defline:  (1 of 77) PTHR32410//PTHR32410:SF152 - FAMILY NOT NAMED // C1 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3307
Name:  ? Carub.0001s3307 Secondary Identifier:  ? PAC:39230370
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3307 0.5kb upstream 0.5kb upstream 3044 true scaffold_1: 12484309-12487352 Capsella rubella
Carub.0001s3307 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12484309-12484808 Capsella rubella
Carub.0001s3307 0.5kb downstream 0.5kb downstream 3044 true scaffold_1: 12484809-12487852 Capsella rubella
Carub.0001s3307 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12487353-12487852 Capsella rubella
Carub.0001s3307 1.0kb upstream 1.0kb upstream 3544 true scaffold_1: 12483809-12487352 Capsella rubella
Carub.0001s3307 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12483809-12484808 Capsella rubella
Carub.0001s3307 1.0kb downstream 1.0kb downstream 3544 true scaffold_1: 12484809-12488352 Capsella rubella
Carub.0001s3307 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12487353-12488352 Capsella rubella
Carub.0001s3307 2.0kb upstream 2.0kb upstream 4544 true scaffold_1: 12482809-12487352 Capsella rubella
Carub.0001s3307 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12482809-12484808 Capsella rubella
Carub.0001s3307 2.0kb downstream 2.0kb downstream 4544 true scaffold_1: 12484809-12489352 Capsella rubella
Carub.0001s3307 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12487353-12489352 Capsella rubella
Carub.0001s3307 5.0kb upstream 5.0kb upstream 7544 true scaffold_1: 12479809-12487352 Capsella rubella
Carub.0001s3307 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12479809-12484808 Capsella rubella
Carub.0001s3307 5.0kb downstream 5.0kb downstream 7544 true scaffold_1: 12484809-12492352 Capsella rubella
Carub.0001s3307 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12487353-12492352 Capsella rubella
Carub.0001s3307 10.0kb upstream 10.0kb upstream 12544 true scaffold_1: 12474809-12487352 Capsella rubella
Carub.0001s3307 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12474809-12484808 Capsella rubella
Carub.0001s3307 10.0kb downstream 10.0kb downstream 12544 true scaffold_1: 12484809-12497352 Capsella rubella
Carub.0001s3307 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12487353-12497352 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380493 5261 Brassicaceae View MSA
123802745 5264 Brassicales-Malvales View MSA
124299913 5266 SBM View MSA
124151214 5268 Malvidae View MSA
123876695 5270 Rosid View MSA
123751823 5271 Pentapetalae View MSA
122797568 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain