Gene : Carub.0001s3367 C. rubella v1.1

Defline:  (1 of 1) K02718 - photosystem II PsbT protein (psbT) Genomic Order:  3367
Name:  ? Carub.0001s3367 Secondary Identifier:  ? PAC:39231736

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3367 0.5kb upstream 0.5kb upstream 602 true scaffold_1: 13011304-13011905 Capsella rubella
Carub.0001s3367 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13011304-13011803 Capsella rubella
Carub.0001s3367 0.5kb downstream 0.5kb downstream 602 true scaffold_1: 13011804-13012405 Capsella rubella
Carub.0001s3367 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13011906-13012405 Capsella rubella
Carub.0001s3367 1.0kb upstream 1.0kb upstream 1102 true scaffold_1: 13010804-13011905 Capsella rubella
Carub.0001s3367 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13010804-13011803 Capsella rubella
Carub.0001s3367 1.0kb downstream 1.0kb downstream 1102 true scaffold_1: 13011804-13012905 Capsella rubella
Carub.0001s3367 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13011906-13012905 Capsella rubella
Carub.0001s3367 2.0kb upstream 2.0kb upstream 2102 true scaffold_1: 13009804-13011905 Capsella rubella
Carub.0001s3367 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13009804-13011803 Capsella rubella
Carub.0001s3367 2.0kb downstream 2.0kb downstream 2102 true scaffold_1: 13011804-13013905 Capsella rubella
Carub.0001s3367 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13011906-13013905 Capsella rubella
Carub.0001s3367 5.0kb upstream 5.0kb upstream 5102 true scaffold_1: 13006804-13011905 Capsella rubella
Carub.0001s3367 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13006804-13011803 Capsella rubella
Carub.0001s3367 5.0kb downstream 5.0kb downstream 5102 true scaffold_1: 13011804-13016905 Capsella rubella
Carub.0001s3367 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13011906-13016905 Capsella rubella
Carub.0001s3367 10.0kb upstream 10.0kb upstream 10102 true scaffold_1: 13001804-13011905 Capsella rubella
Carub.0001s3367 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13001804-13011803 Capsella rubella
Carub.0001s3367 10.0kb downstream 10.0kb downstream 10102 true scaffold_1: 13011804-13021905 Capsella rubella
Carub.0001s3367 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13011906-13021905 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029198 5273 Angiosperm View MSA
122344114 5261 Brassicaceae View MSA
123837171 5264 Brassicales-Malvales View MSA
124322254 5266 SBM View MSA
124248044 5268 Malvidae View MSA
124037996 5270 Rosid View MSA
123745161 5271 Pentapetalae View MSA
122796453 5272 Eudicot View MSA
121298572 5274 Embryophyte View MSA
123336536 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain