Gene : Carub.0001s3971 C. rubella v1.1
Defline:  (1 of 1) K13719 - ubiquitin thioesterase OTU1 (OTU1, YOD1) Genomic Order:  3971
Name:  ? Carub.0001s3971 Secondary Identifier:  ? PAC:39229504
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3971 0.5kb upstream 0.5kb upstream 3013 true scaffold_1: 17512933-17515945 Capsella rubella
Carub.0001s3971 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17515446-17515945 Capsella rubella
Carub.0001s3971 0.5kb downstream 0.5kb downstream 3013 true scaffold_1: 17512433-17515445 Capsella rubella
Carub.0001s3971 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17512433-17512932 Capsella rubella
Carub.0001s3971 1.0kb upstream 1.0kb upstream 3513 true scaffold_1: 17512933-17516445 Capsella rubella
Carub.0001s3971 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17515446-17516445 Capsella rubella
Carub.0001s3971 1.0kb downstream 1.0kb downstream 3513 true scaffold_1: 17511933-17515445 Capsella rubella
Carub.0001s3971 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17511933-17512932 Capsella rubella
Carub.0001s3971 2.0kb upstream 2.0kb upstream 4513 true scaffold_1: 17512933-17517445 Capsella rubella
Carub.0001s3971 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17515446-17517445 Capsella rubella
Carub.0001s3971 2.0kb downstream 2.0kb downstream 4513 true scaffold_1: 17510933-17515445 Capsella rubella
Carub.0001s3971 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17510933-17512932 Capsella rubella
Carub.0001s3971 5.0kb upstream 5.0kb upstream 7513 true scaffold_1: 17512933-17520445 Capsella rubella
Carub.0001s3971 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17515446-17520445 Capsella rubella
Carub.0001s3971 5.0kb downstream 5.0kb downstream 7513 true scaffold_1: 17507933-17515445 Capsella rubella
Carub.0001s3971 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17507933-17512932 Capsella rubella
Carub.0001s3971 10.0kb upstream 10.0kb upstream 12513 true scaffold_1: 17512933-17525445 Capsella rubella
Carub.0001s3971 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17515446-17525445 Capsella rubella
Carub.0001s3971 10.0kb downstream 10.0kb downstream 12513 true scaffold_1: 17502933-17515445 Capsella rubella
Carub.0001s3971 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17502933-17512932 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371218 5261 Brassicaceae View MSA
123827983 5264 Brassicales-Malvales View MSA
124337001 5266 SBM View MSA
124237421 5268 Malvidae View MSA
124061628 5270 Rosid View MSA
123738549 5271 Pentapetalae View MSA
122788500 5272 Eudicot View MSA
122046032 5273 Angiosperm View MSA
121345268 5274 Embryophyte View MSA
123424822 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain