Gene : Carub.0001s3973 C. rubella v1.1
Defline:  (1 of 8) PTHR24349:SF89 - CALCIUM-DEPENDENT PROTEIN KINASE 29 Genomic Order:  3973
Name:  ? Carub.0001s3973 Secondary Identifier:  ? PAC:39228407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3973 0.5kb upstream 0.5kb upstream 3372 true scaffold_1: 17521017-17524388 Capsella rubella
Carub.0001s3973 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17521017-17521516 Capsella rubella
Carub.0001s3973 0.5kb downstream 0.5kb downstream 3372 true scaffold_1: 17521517-17524888 Capsella rubella
Carub.0001s3973 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17524389-17524888 Capsella rubella
Carub.0001s3973 1.0kb upstream 1.0kb upstream 3872 true scaffold_1: 17520517-17524388 Capsella rubella
Carub.0001s3973 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17520517-17521516 Capsella rubella
Carub.0001s3973 1.0kb downstream 1.0kb downstream 3872 true scaffold_1: 17521517-17525388 Capsella rubella
Carub.0001s3973 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17524389-17525388 Capsella rubella
Carub.0001s3973 2.0kb upstream 2.0kb upstream 4872 true scaffold_1: 17519517-17524388 Capsella rubella
Carub.0001s3973 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17519517-17521516 Capsella rubella
Carub.0001s3973 2.0kb downstream 2.0kb downstream 4872 true scaffold_1: 17521517-17526388 Capsella rubella
Carub.0001s3973 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17524389-17526388 Capsella rubella
Carub.0001s3973 5.0kb upstream 5.0kb upstream 7872 true scaffold_1: 17516517-17524388 Capsella rubella
Carub.0001s3973 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17516517-17521516 Capsella rubella
Carub.0001s3973 5.0kb downstream 5.0kb downstream 7872 true scaffold_1: 17521517-17529388 Capsella rubella
Carub.0001s3973 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17524389-17529388 Capsella rubella
Carub.0001s3973 10.0kb upstream 10.0kb upstream 12872 true scaffold_1: 17511517-17524388 Capsella rubella
Carub.0001s3973 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17511517-17521516 Capsella rubella
Carub.0001s3973 10.0kb downstream 10.0kb downstream 12872 true scaffold_1: 17521517-17534388 Capsella rubella
Carub.0001s3973 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17524389-17534388 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343131 5261 Brassicaceae View MSA
123783421 5264 Brassicales-Malvales View MSA
124281656 5266 SBM View MSA
124136378 5268 Malvidae View MSA
123864248 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain