Gene : Carub.0001s3134 C. rubella v1.1
Defline:  (1 of 4) PTHR11206//PTHR11206:SF102 - MULTIDRUG RESISTANCE PROTEIN // MATE EFFLUX FAMILY PROTEIN Genomic Order:  3134
Name:  ? Carub.0001s3134 Secondary Identifier:  ? PAC:39230785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3134 0.5kb upstream 0.5kb upstream 4191 true scaffold_1: 11635656-11639846 Capsella rubella
Carub.0001s3134 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11635656-11636155 Capsella rubella
Carub.0001s3134 0.5kb downstream 0.5kb downstream 4191 true scaffold_1: 11636156-11640346 Capsella rubella
Carub.0001s3134 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11639847-11640346 Capsella rubella
Carub.0001s3134 1.0kb upstream 1.0kb upstream 4691 true scaffold_1: 11635156-11639846 Capsella rubella
Carub.0001s3134 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11635156-11636155 Capsella rubella
Carub.0001s3134 1.0kb downstream 1.0kb downstream 4691 true scaffold_1: 11636156-11640846 Capsella rubella
Carub.0001s3134 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11639847-11640846 Capsella rubella
Carub.0001s3134 2.0kb upstream 2.0kb upstream 5691 true scaffold_1: 11634156-11639846 Capsella rubella
Carub.0001s3134 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11634156-11636155 Capsella rubella
Carub.0001s3134 2.0kb downstream 2.0kb downstream 5691 true scaffold_1: 11636156-11641846 Capsella rubella
Carub.0001s3134 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11639847-11641846 Capsella rubella
Carub.0001s3134 5.0kb upstream 5.0kb upstream 8691 true scaffold_1: 11631156-11639846 Capsella rubella
Carub.0001s3134 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11631156-11636155 Capsella rubella
Carub.0001s3134 5.0kb downstream 5.0kb downstream 8691 true scaffold_1: 11636156-11644846 Capsella rubella
Carub.0001s3134 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11639847-11644846 Capsella rubella
Carub.0001s3134 10.0kb upstream 10.0kb upstream 13691 true scaffold_1: 11626156-11639846 Capsella rubella
Carub.0001s3134 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11626156-11636155 Capsella rubella
Carub.0001s3134 10.0kb downstream 10.0kb downstream 13691 true scaffold_1: 11636156-11649846 Capsella rubella
Carub.0001s3134 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11639847-11649846 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374208 5261 Brassicaceae View MSA
123840118 5264 Brassicales-Malvales View MSA
124350751 5266 SBM View MSA
124249162 5268 Malvidae View MSA
124066814 5270 Rosid View MSA
123744477 5271 Pentapetalae View MSA
122791192 5272 Eudicot View MSA
122050429 5273 Angiosperm View MSA
121311902 5274 Embryophyte View MSA
123349133 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain