Gene : Carub.0001s3157 C. rubella v1.1
Defline:  (1 of 12) PF12609 - Wound-induced protein (DUF3774) Genomic Order:  3157
Name:  ? Carub.0001s3157 Secondary Identifier:  ? PAC:39230216
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3157 0.5kb upstream 0.5kb upstream 941 true scaffold_1: 11737603-11738543 Capsella rubella
Carub.0001s3157 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11738044-11738543 Capsella rubella
Carub.0001s3157 0.5kb downstream 0.5kb downstream 941 true scaffold_1: 11737103-11738043 Capsella rubella
Carub.0001s3157 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11737103-11737602 Capsella rubella
Carub.0001s3157 1.0kb upstream 1.0kb upstream 1441 true scaffold_1: 11737603-11739043 Capsella rubella
Carub.0001s3157 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11738044-11739043 Capsella rubella
Carub.0001s3157 1.0kb downstream 1.0kb downstream 1441 true scaffold_1: 11736603-11738043 Capsella rubella
Carub.0001s3157 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11736603-11737602 Capsella rubella
Carub.0001s3157 2.0kb upstream 2.0kb upstream 2441 true scaffold_1: 11737603-11740043 Capsella rubella
Carub.0001s3157 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11738044-11740043 Capsella rubella
Carub.0001s3157 2.0kb downstream 2.0kb downstream 2441 true scaffold_1: 11735603-11738043 Capsella rubella
Carub.0001s3157 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11735603-11737602 Capsella rubella
Carub.0001s3157 5.0kb upstream 5.0kb upstream 5441 true scaffold_1: 11737603-11743043 Capsella rubella
Carub.0001s3157 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11738044-11743043 Capsella rubella
Carub.0001s3157 5.0kb downstream 5.0kb downstream 5441 true scaffold_1: 11732603-11738043 Capsella rubella
Carub.0001s3157 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11732603-11737602 Capsella rubella
Carub.0001s3157 10.0kb upstream 10.0kb upstream 10441 true scaffold_1: 11737603-11748043 Capsella rubella
Carub.0001s3157 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11738044-11748043 Capsella rubella
Carub.0001s3157 10.0kb downstream 10.0kb downstream 10441 true scaffold_1: 11727603-11738043 Capsella rubella
Carub.0001s3157 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11727603-11737602 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379501 5261 Brassicaceae View MSA
123839482 5264 Brassicales-Malvales View MSA
124350775 5266 SBM View MSA
124252906 5268 Malvidae View MSA
124074460 5270 Rosid View MSA
123752269 5271 Pentapetalae View MSA
122786865 5272 Eudicot View MSA
122051043 5273 Angiosperm View MSA
121312265 5274 Embryophyte View MSA
123349454 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain