Gene : Carub.0001s3163 C. rubella v1.1
Defline:  (1 of 1) PTHR11214//PTHR11214:SF125 - BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE // BETA-1,3-GALACTOSYLTRANSFERASE 8-RELATED Genomic Order:  3163
Name:  ? Carub.0001s3163 Secondary Identifier:  ? PAC:39229610
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3163 0.5kb upstream 0.5kb upstream 2143 true scaffold_1: 11764708-11766850 Capsella rubella
Carub.0001s3163 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11766351-11766850 Capsella rubella
Carub.0001s3163 0.5kb downstream 0.5kb downstream 2143 true scaffold_1: 11764208-11766350 Capsella rubella
Carub.0001s3163 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11764208-11764707 Capsella rubella
Carub.0001s3163 1.0kb upstream 1.0kb upstream 2643 true scaffold_1: 11764708-11767350 Capsella rubella
Carub.0001s3163 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11766351-11767350 Capsella rubella
Carub.0001s3163 1.0kb downstream 1.0kb downstream 2643 true scaffold_1: 11763708-11766350 Capsella rubella
Carub.0001s3163 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11763708-11764707 Capsella rubella
Carub.0001s3163 2.0kb upstream 2.0kb upstream 3643 true scaffold_1: 11764708-11768350 Capsella rubella
Carub.0001s3163 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11766351-11768350 Capsella rubella
Carub.0001s3163 2.0kb downstream 2.0kb downstream 3643 true scaffold_1: 11762708-11766350 Capsella rubella
Carub.0001s3163 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11762708-11764707 Capsella rubella
Carub.0001s3163 5.0kb upstream 5.0kb upstream 6643 true scaffold_1: 11764708-11771350 Capsella rubella
Carub.0001s3163 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11766351-11771350 Capsella rubella
Carub.0001s3163 5.0kb downstream 5.0kb downstream 6643 true scaffold_1: 11759708-11766350 Capsella rubella
Carub.0001s3163 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11759708-11764707 Capsella rubella
Carub.0001s3163 10.0kb upstream 10.0kb upstream 11643 true scaffold_1: 11764708-11776350 Capsella rubella
Carub.0001s3163 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11766351-11776350 Capsella rubella
Carub.0001s3163 10.0kb downstream 10.0kb downstream 11643 true scaffold_1: 11754708-11766350 Capsella rubella
Carub.0001s3163 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11754708-11764707 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369765 5261 Brassicaceae View MSA
123830616 5264 Brassicales-Malvales View MSA
124344180 5266 SBM View MSA
124250344 5268 Malvidae View MSA
124066955 5270 Rosid View MSA
123739966 5271 Pentapetalae View MSA
122785609 5272 Eudicot View MSA
122048102 5273 Angiosperm View MSA
121348547 5274 Embryophyte View MSA
123427932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain