Gene : Carub.0001s3440 C. rubella v1.1
Defline:  (1 of 3) PTHR31065//PTHR31065:SF12 - FAMILY NOT NAMED // PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  3440
Name:  ? Carub.0001s3440 Secondary Identifier:  ? PAC:39230456
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3440 0.5kb upstream 0.5kb upstream 1911 true scaffold_1: 14596281-14598191 Capsella rubella
Carub.0001s3440 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14596281-14596780 Capsella rubella
Carub.0001s3440 0.5kb downstream 0.5kb downstream 1911 true scaffold_1: 14596781-14598691 Capsella rubella
Carub.0001s3440 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14598192-14598691 Capsella rubella
Carub.0001s3440 1.0kb upstream 1.0kb upstream 2411 true scaffold_1: 14595781-14598191 Capsella rubella
Carub.0001s3440 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14595781-14596780 Capsella rubella
Carub.0001s3440 1.0kb downstream 1.0kb downstream 2411 true scaffold_1: 14596781-14599191 Capsella rubella
Carub.0001s3440 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14598192-14599191 Capsella rubella
Carub.0001s3440 2.0kb upstream 2.0kb upstream 3411 true scaffold_1: 14594781-14598191 Capsella rubella
Carub.0001s3440 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14594781-14596780 Capsella rubella
Carub.0001s3440 2.0kb downstream 2.0kb downstream 3411 true scaffold_1: 14596781-14600191 Capsella rubella
Carub.0001s3440 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14598192-14600191 Capsella rubella
Carub.0001s3440 5.0kb upstream 5.0kb upstream 6411 true scaffold_1: 14591781-14598191 Capsella rubella
Carub.0001s3440 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14591781-14596780 Capsella rubella
Carub.0001s3440 5.0kb downstream 5.0kb downstream 6411 true scaffold_1: 14596781-14603191 Capsella rubella
Carub.0001s3440 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14598192-14603191 Capsella rubella
Carub.0001s3440 10.0kb upstream 10.0kb upstream 11411 true scaffold_1: 14586781-14598191 Capsella rubella
Carub.0001s3440 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14586781-14596780 Capsella rubella
Carub.0001s3440 10.0kb downstream 10.0kb downstream 11411 true scaffold_1: 14596781-14608191 Capsella rubella
Carub.0001s3440 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14598192-14608191 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343715 5261 Brassicaceae View MSA
123783829 5264 Brassicales-Malvales View MSA
124282042 5266 SBM View MSA
124136703 5268 Malvidae View MSA
124069280 5270 Rosid View MSA
123750243 5271 Pentapetalae View MSA
122790111 5272 Eudicot View MSA
122049805 5273 Angiosperm View MSA
121349108 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain