Gene : Carub.0001s3442 C. rubella v1.1
Genomic Order:  3442 Name:  ? Carub.0001s3442
Secondary Identifier:  ? PAC:39231517
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3442 0.5kb upstream 0.5kb upstream 3459 true scaffold_1: 14623341-14626799 Capsella rubella
Carub.0001s3442 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14626300-14626799 Capsella rubella
Carub.0001s3442 0.5kb downstream 0.5kb downstream 3459 true scaffold_1: 14622841-14626299 Capsella rubella
Carub.0001s3442 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14622841-14623340 Capsella rubella
Carub.0001s3442 1.0kb upstream 1.0kb upstream 3959 true scaffold_1: 14623341-14627299 Capsella rubella
Carub.0001s3442 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14626300-14627299 Capsella rubella
Carub.0001s3442 1.0kb downstream 1.0kb downstream 3959 true scaffold_1: 14622341-14626299 Capsella rubella
Carub.0001s3442 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14622341-14623340 Capsella rubella
Carub.0001s3442 2.0kb upstream 2.0kb upstream 4959 true scaffold_1: 14623341-14628299 Capsella rubella
Carub.0001s3442 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14626300-14628299 Capsella rubella
Carub.0001s3442 2.0kb downstream 2.0kb downstream 4959 true scaffold_1: 14621341-14626299 Capsella rubella
Carub.0001s3442 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14621341-14623340 Capsella rubella
Carub.0001s3442 5.0kb upstream 5.0kb upstream 7959 true scaffold_1: 14623341-14631299 Capsella rubella
Carub.0001s3442 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14626300-14631299 Capsella rubella
Carub.0001s3442 5.0kb downstream 5.0kb downstream 7959 true scaffold_1: 14618341-14626299 Capsella rubella
Carub.0001s3442 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14618341-14623340 Capsella rubella
Carub.0001s3442 10.0kb upstream 10.0kb upstream 12959 true scaffold_1: 14623341-14636299 Capsella rubella
Carub.0001s3442 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14626300-14636299 Capsella rubella
Carub.0001s3442 10.0kb downstream 10.0kb downstream 12959 true scaffold_1: 14613341-14626299 Capsella rubella
Carub.0001s3442 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14613341-14623340 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379951 5261 Brassicaceae View MSA
123802494 5264 Brassicales-Malvales View MSA
124299684 5266 SBM View MSA
124250670 5268 Malvidae View MSA
124066473 5270 Rosid View MSA
123749443 5271 Pentapetalae View MSA
122788063 5272 Eudicot View MSA
122041555 5273 Angiosperm View MSA
121350164 5274 Embryophyte View MSA
123381599 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain