Gene : Carub.0001s3449 C. rubella v1.1
Defline:  (1 of 1) PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 Genomic Order:  3449
Name:  ? Carub.0001s3449 Secondary Identifier:  ? PAC:39228976
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0001s3449 0.5kb upstream 0.5kb upstream 3407 true scaffold_1: 14702542-14705948 Capsella rubella
Carub.0001s3449 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14705449-14705948 Capsella rubella
Carub.0001s3449 0.5kb downstream 0.5kb downstream 3407 true scaffold_1: 14702042-14705448 Capsella rubella
Carub.0001s3449 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14702042-14702541 Capsella rubella
Carub.0001s3449 1.0kb upstream 1.0kb upstream 3907 true scaffold_1: 14702542-14706448 Capsella rubella
Carub.0001s3449 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14705449-14706448 Capsella rubella
Carub.0001s3449 1.0kb downstream 1.0kb downstream 3907 true scaffold_1: 14701542-14705448 Capsella rubella
Carub.0001s3449 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14701542-14702541 Capsella rubella
Carub.0001s3449 2.0kb upstream 2.0kb upstream 4907 true scaffold_1: 14702542-14707448 Capsella rubella
Carub.0001s3449 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14705449-14707448 Capsella rubella
Carub.0001s3449 2.0kb downstream 2.0kb downstream 4907 true scaffold_1: 14700542-14705448 Capsella rubella
Carub.0001s3449 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14700542-14702541 Capsella rubella
Carub.0001s3449 5.0kb upstream 5.0kb upstream 7907 true scaffold_1: 14702542-14710448 Capsella rubella
Carub.0001s3449 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14705449-14710448 Capsella rubella
Carub.0001s3449 5.0kb downstream 5.0kb downstream 7907 true scaffold_1: 14697542-14705448 Capsella rubella
Carub.0001s3449 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14697542-14702541 Capsella rubella
Carub.0001s3449 10.0kb upstream 10.0kb upstream 12907 true scaffold_1: 14702542-14715448 Capsella rubella
Carub.0001s3449 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14705449-14715448 Capsella rubella
Carub.0001s3449 10.0kb downstream 10.0kb downstream 12907 true scaffold_1: 14692542-14705448 Capsella rubella
Carub.0001s3449 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14692542-14702541 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375177 5261 Brassicaceae View MSA
123836425 5264 Brassicales-Malvales View MSA
124339526 5266 SBM View MSA
124241091 5268 Malvidae View MSA
124066060 5270 Rosid View MSA
123747160 5271 Pentapetalae View MSA
122792430 5272 Eudicot View MSA
122046546 5273 Angiosperm View MSA
121348695 5274 Embryophyte View MSA
123380977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain